Thioalkalivibrio versutus: TVD_13150
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Entry
TVD_13150 CDS
T03959
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tvr
Thioalkalivibrio versutus
Pathway
tvr03420
Nucleotide excision repair
tvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TVD_13150 (uvrD)
03430 Mismatch repair
TVD_13150 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvr03400
]
TVD_13150 (uvrD)
Enzymes [BR:
tvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TVD_13150 (uvrD)
DNA repair and recombination proteins [BR:
tvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TVD_13150 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TVD_13150 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKJ96511
UniProt:
A0A0G3GCA0
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All DBs
Position
2831550..2833757
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AA seq
735 aa
AA seq
DB search
MDVSPLLDSLNPAQREAVAAPPHPVLVLAGAGSGKTRVLVHRIAWLIGVEGVAPHSLLAV
TFTNKAAAEMRGRIESLLGHPATGLWVGTFHGLAHRLLRQHWQEAKLPQAFQILDSDDQL
RMVKRVLRGLELDESRWPPKQAQWYINARKDEGSRPEHLPDTGDPVARQWVRVYTTYQQA
CERAGVVDFAELMLRSLELLRDNKALLEHYRTRFRHVLVDEFQDTNDIQYGWLRLLAGDS
PVFAVGDDDQSIYGWRGAKIENIQHFQKDYPGTQVVRLEQNYRSSANILNAANALIRHNS
GRLGKELWTEGHEGAPVRLYTALNEQEEARFIAETIARHVDQGGLYRECAVLYRSNAQSR
VLEETFIGRRMPYRVYGGLRFFERQEIRDALAYLRLAGNGDDDAAFLRVVNQPPRGIGEK
TLEGLRQAAQAADTSLLQAATHAVDADALPGRARTAVAGFVQLVRTLQQELPRQPLADQV
EQAIERAQLREHYKKEKGERGEARLENLDELVGAARAFDMSSTAESEEGEGNRLTEFLAH
AALEAGEGAADPHEDAVQMMTLHSAKGLEFPLVFLTGMEEGLFPNARSLEEPGRLEEERR
LAYVGMTRAEQELYLIHAETRRLYGRESYNVASRFINEIPEGALEVLRPQASPYGAGRFA
AARNKTAGFGAMDAQAAEASAVGLAIGARVHHAKFGEGLITQFEGSGNSARVQVNFAHAG
SKWLVLSFAKLEVLG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccccctgctcgattccctcaacccggcccagcgcgaggccgtggccgcc
ccgccgcatccggtgctggtcctggccggcgccggctccggcaagacccgcgtgctggtg
caccgcatcgcctggctgattggcgtcgagggcgtggccccgcacagcctgctggcggtc
acttttaccaacaaggcggcggccgagatgcgcgggcgcatcgagtcgttgctggggcac
ccggccaccgggctgtgggtcgggaccttccatggcctcgcccaccgcctgctgcgccag
cactggcaggaggcgaagctgccgcaggccttccagatcctcgactccgatgaccagctg
cgcatggtcaagcgcgtgctgcgcgggctggagctggacgagtcgcggtggccgcccaag
caggcgcagtggtacatcaacgcgcgcaaggacgagggctcgcgcccggaacacctgccg
gataccggcgacccggtcgcccgccagtgggtacgcgtctacaccacctaccagcaggcc
tgcgagcgcgccggtgtggtggacttcgccgagctgatgctgcgctcgctggaactgctg
cgcgacaacaaggccctgctggagcactaccgcacgcgctttcgccacgtgctggtcgac
gaattccaggacaccaacgacatccagtacggctggttgcgcctgctcgccggggacagt
ccggtgttcgccgtgggcgacgacgaccagtcgatctacggctggcgcggcgcgaagatc
gagaacatccagcacttccagaaggactacccgggcacccaggtcgtgcgcctggagcag
aactaccgctccagcgccaacatcctgaacgccgccaacgccctgatccggcacaactcc
ggccgcctgggcaaggagctgtggaccgagggccacgaaggcgcaccggtccgcctgtac
accgcgctgaacgagcaggaagaggcgcgcttcatcgccgagaccatcgcccgccacgtg
gaccagggcgggctgtaccgcgaatgtgcggtgctgtatcgctccaatgcccagtcacgc
gtgctggaagagaccttcatcggccggcgcatgccctaccgggtctacggcggcctgcgc
ttcttcgagcgccaggagatccgcgatgccctggcctacctgcgcctggccggcaacggc
gatgacgatgccgccttcctgcgcgtggtcaaccagcccccgcgcgggatcggcgagaag
accctggagggcctgcgccaggccgcccaggcagccgacaccagcctgctgcaggccgcc
acccacgcggtggacgccgacgccctgcccggacgcgcgcgcaccgcagtcgccgggttc
gtgcagctggtccgcaccctgcagcaggagctcccgcgccagccgctggccgatcaggtg
gaacaggcgatcgagcgcgcgcaattgcgcgagcactacaaaaaggaaaagggcgagcgt
ggcgaggctcggctggaaaacctggacgagctggtgggggccgcgcgcgccttcgacatg
agtagcaccgccgagagcgaggaaggcgagggcaatcgcctgaccgaattcctcgcccac
gcggcactggaggccggcgagggtgcggccgacccgcacgaggacgcggtgcagatgatg
accctgcactcggccaagggcctggagtttccgctggtcttcctgaccggcatggaagag
gggctgttccccaacgcccgctcgctggaggagccggggcgactggaggaggaacgccgc
ctggcctatgtcggcatgacccgcgccgaacaggagctgtacctgatccatgccgagacg
cggcggctgtatggacgcgagtcctacaacgtcgcctcgcgcttcatcaacgagatcccc
gagggcgcgctggaagtgctgcgcccgcaggcctcgccgtatggcgcgggccgctttgcc
gcggcccggaacaagacggcgggcttcggggccatggatgcacaggccgccgaggcctcc
gcggtgggcctggcgatcggcgcacgggtgcaccacgcgaagttcggcgaggggctgatc
acccagttcgagggttccggcaactcggcccgggtccaggtgaacttcgcccacgcgggc
tccaagtggctggtgctgagcttcgccaagctggaggtcctgggttag
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