Thioalkalivibrio versutus: TVD_13655
Help
Entry
TVD_13655 CDS
T03959
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tvr
Thioalkalivibrio versutus
Pathway
tvr00300
Lysine biosynthesis
tvr00470
D-Amino acid metabolism
tvr01100
Metabolic pathways
tvr01110
Biosynthesis of secondary metabolites
tvr01120
Microbial metabolism in diverse environments
tvr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TVD_13655 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TVD_13655 (dapF)
Enzymes [BR:
tvr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TVD_13655 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AKJ96343
UniProt:
A0A0G3G527
LinkDB
All DBs
Position
complement(2937956..2938792)
Genome browser
AA seq
278 aa
AA seq
DB search
MRLEFTKMHGLGNDFVVIDGIRQNVRLDEPTLRHLADRHFGIGCDQILLVEPPGDPAQAL
FRYRIFNADGSEVEQCGNGARCFARFVREQGLTEAREIPVETLGGRIVLHVEDDEQVRVD
MGRPEFAPARIPLLAEAEADAYTLDVQGHSITLGAVSMGNPHAVILVDDVASAPVHEIGP
IIERHASFPRRVNVGFAALRDRGHVDLRVFERGVGETLACGSGAAAAMAVLRRRGLVDDN
LEATLPGGTLVLSWTGQAEAPVWLTGPATTVFNGWIDL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctggaattcaccaagatgcacggcctgggcaacgacttcgtggtcatcgacggc
atacgtcagaacgtgcggctcgacgagccaacgctgcgtcacctggccgatcgccacttc
ggcatcggctgcgatcagatcctgctggtggagcccccgggcgatccggcgcaggccctg
ttccgctaccgcatcttcaatgccgatggctccgaggtagagcagtgcggcaacggcgcg
cgctgcttcgcccgcttcgtccgcgagcagggcctgaccgaggcccgcgagatcccggtc
gagaccctcggcgggcgcatcgtgctgcatgtcgaggacgacgagcaggtgcgcgtggac
atggggcggccggagttcgcaccggcgcgcatcccgctgctcgccgaggccgaggccgat
gcctacacgctggatgtgcagggccactcgatcaccctgggcgcggtctccatgggcaac
ccgcatgcggtgatcctggtcgacgacgtggccagcgcaccggtccacgagatcggcccg
atcatcgaacgccacgcaagcttcccgcgccgcgtcaatgtcgggttcgccgcactgcgc
gaccgcggacatgtcgacctgcgggtgttcgaacgcggggtcggcgagacactcgcctgt
ggcagcggcgcggccgccgcgatggccgtattgcgacgccgcgggctggtcgacgacaac
ctcgaagcgaccctgccgggcgggacccttgtgctaagctggaccggacaggccgaggct
ccggtttggctgaccgggccggccaccacggtattcaacggctggatcgatctatga
DBGET
integrated database retrieval system