Trametes versicolor: TRAVEDRAFT_108558
Help
Entry
TRAVEDRAFT_108558 CDS
T04795
Name
(RefSeq) FtsJ-domain-containing protein
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_108558
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TRAVEDRAFT_108558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Imm-NTF2
Motif
Other DBs
NCBI-GeneID:
19406785
NCBI-ProteinID:
XP_008032906
JGI:
108558
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MGKAQKKTGKGRLDKYYKLAKEQGYRARSAFKLIQLNKKYSFLESARCCIDLCAAPGGWL
QVASKYMPTNSVIVGVDLVPIRAIPRVVTFASDITTQQCRNQLRNELKDWKADVVLHDGA
PNVGTAWVQDAYSQSELVLMSMKLAAEFLIKGGTFVTKVFRSADYNNLIWVFNQLFGKVE
ATKPPSSRNVSAEIFVVCRDFLAPKHIDPKFFDPRHVFKELSMSVPADEQSLAAQKSAQV
NVFQPEKKRRQRSGYEEGDYTLYKEAGAAEFLRGPDAVTFLGTYNKITFTTDEEKEWLNL
DITTPDVKANCDDLKVLGKGDFKALLKWRTAIREEIGLENKSKDTEELTEIVEVTEEVDE
EEQIQQELERLNAEASARTKRERRRANEVKTRTIQRMQLRMVAPMDIGMEQNDDALRGQD
DIFELDDAEKALRGKRSGAGYDDDSEDDSEEEAEEDNEVLDEDEERERKVAGLEAELDGL
YDAYQEHLRERDAKWKVNEARRKSKAHEEWNGIGKGGDDPESDKEEGGYERIQRKKARLG
EDSSDEEMSDEESDEEEAEEEPAAGKKRRADGPADSGAKAKKARVITKVQEPKVTAPLSR
SAELWFKQGLFADVDAEIEDDDEEEEEVEEEEEEEEIDEAMSGVEDEAASNDEDDYNDFE
IVPQDASDDDMDMWDVEGEDEDEIKQAKIRKHGLTTAEAMTLATQLVNREKTRTELVNSG
FNRYSLNSKDDLPPWFLDDEEKHYKSNIPITKEAVDALRAKMRALDARPIKKVAEAKARK
KFKAAQRLEKTLKKAEGVNETTDLTEREKAKQIEKLLAKGAKTKLKKDIKVVVAKGANRG
QKGRPTGVKGRYLMVDSRMKKEVCLLSSCGYVVLKGPHSSGRRNGKRRPPRSASVHRLLA
ALPSPRSCSSQTVIYAGCTSHPVPLPSSMIDYIAALLVYTSVLYSMSWSSIWGSFHCCVS
CSAEYTFGGGSRRSDSLSQSRRNCVHASSDDASGQVT
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggcccaaaagaagaccggaaagggtcgtctggacaagtactacaagctcgca
aaagagcagggctaccgtgcccgttcagccttcaagctgatccagctgaacaagaagtac
tccttcctcgagtccgcacgatgctgtatcgatctttgtgccgccccgggtggttggctg
caagtcgcgagcaagtacatgcccacgaacagtgtcatcgtcggtgtcgatttggtgccc
attagggccatcccccgtgtcgtcacattcgcctcggacatcacgacacagcagtgccgc
aaccagctccgcaatgagctcaaggactggaaggcggacgtcgtgctgcacgacggtgcg
ccgaacgtcggtacggcgtgggtgcaggacgcctacagccagtccgagctcgtgctcatg
agtatgaagctcgcggccgagttcctcatcaagggcggcaccttcgtgacgaaggtcttc
cgctcggccgactacaacaacctcatctgggtgttcaaccagctcttcgggaaggtcgag
gcgacgaagccgccctcatcgcgtaacgtctccgcggagatcttcgtcgtgtgccgcgac
ttcctcgcgccgaagcacatcgaccccaagttcttcgacccgaggcacgtcttcaaagag
ctgtcgatgtcggtgcctgcggacgagcagagtcttgccgcgcagaagagcgcgcaggtg
aacgtcttccagcccgagaagaagcgtcgccagcgttctggttacgaggagggcgactac
actttgtacaaggaggccggagccgcggagttcctcaggggtcccgacgccgtcacgttc
ctcggaacgtacaacaagatcactttcacgaccgacgaggagaaggagtggttgaacctg
gacattacgactccagacgtaaaggcgaactgcgatgacctgaaggttttgggcaagggt
gatttcaaggcgctgctcaagtggcggacagccattcgagaagagattggtctcgagaac
aagtccaaggacaccgaagagcttactgagatcgtagaggtcacagaagaggtcgacgag
gaagagcaaattcagcaggagctcgagcgattgaacgcggaggcatcagcccgtacaaag
cgcgagcgtcgccgcgcaaacgaggtcaagacgcgcaccatccagcggatgcagctgcgc
atggtcgcccccatggacatcggtatggagcagaacgacgacgcgctccgcggccaggac
gacatcttcgagctcgatgacgccgagaaggccctccgcgggaagcgctccggggccggc
tacgacgatgactccgaagacgactccgaggaggaagccgaggaggacaacgaagtgctg
gacgaggatgaggagcgcgagcgcaaggtcgcaggactggaggcggagctggacgggctg
tacgacgcgtaccaggagcacttgcgggagcgggacgcgaagtggaaggtgaacgaggcg
cggcggaaaagcaaggcgcacgaagagtggaacggcattgggaaggggggcgatgatcca
gagagcgacaaggaggagggtgggtacgagcggatccagcggaagaaggcgcgtcttggc
gaggactcgagtgacgaggagatgagcgacgaggagagcgacgaggaggaggcagaggag
gagcctgctgctgggaagaagaggcgcgcggacggtcctgcggattctggtgcgaaagcg
aagaaggcgcgggttatcacgaaggtgcaggagcccaaggtcactgcgcccctcagccga
tctgccgaactctggttcaagcagggtctctttgctgacgtcgacgccgagatcgaggac
gatgacgaagaggaagaagaggttgaggaggaagaggaggaggaagagatcgacgaggct
atgagtggagttgaggatgaagctgcatcaaacgacgaagacgactacaacgacttcgaa
attgtacctcaagacgccagcgacgacgacatggacatgtgggacgtcgaaggcgaggac
gaggatgaaatcaagcaggcgaagatccgaaaacacggcctcaccaccgcagaagcgatg
acactcgccacgcagctcgtgaaccgcgaaaagacacgcaccgagctcgtcaactccggc
ttcaaccggtactcgctcaactccaaagacgacctcccgccctggttcctcgacgacgag
gaaaagcactacaagtcgaacatccccatcaccaaggaggccgtcgacgcgctccgcgcc
aagatgcgcgccttggacgcgcggccgatcaagaaggtcgcggaggcaaaggcccgcaag
aaattcaaggccgcgcagcggctcgagaagacgctcaagaaggcggagggcgtgaacgag
acgacggacctgacggagcgcgagaaggcgaagcagatcgagaagctgctcgcgaagggc
gcgaagacgaagctcaagaaggacatcaaggtcgtcgtggccaagggtgcgaaccgcggc
cagaagggacggccgacgggtgtcaagggccgctaccttatggtggattcaaggatgaag
aaagaggtgtgccttttgtctagctgtggatacgttgtgctcaagggacctcacagctcc
gggcgaagaaacggaaagagaaggccaccaagaagcgcaagcgtacataggcttctggct
gccctcccttcgcctcgttcttgttcttcccagactgtcatatatgccggctgcacatca
caccctgtacctcttcccagtagcatgatcgattatattgcagcattactagtgtatacg
tccgtgctctatagtatgtcgtggtcatccatctggggatcgttccactgctgcgtgtcc
tgcagcgcggagtacaccttcggcggcggttcgcgcagaagcgacagcctatcgcaatct
cggaggaattgcgtccacgcttcttccgacgacgcatccgggcaagtgacctag
DBGET
integrated database retrieval system
