Trametes versicolor: TRAVEDRAFT_109189
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Entry
TRAVEDRAFT_109189 CDS
T04795
Name
(RefSeq) histone acetyltransferase type B subunit 2
KO
K10752
histone-binding protein RBBP4
Organism
tvs
Trametes versicolor
Pathway
tvs03082
ATP-dependent chromatin remodeling
tvs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRAVEDRAFT_109189
03083 Polycomb repressive complex
TRAVEDRAFT_109189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_109189
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
TRAVEDRAFT_109189
Histone modification proteins
HAT complexes
HATB complex
TRAVEDRAFT_109189
HDAC complexes
Sin3A-HDAC complex
TRAVEDRAFT_109189
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
TRAVEDRAFT_109189
PRC2.2
TRAVEDRAFT_109189
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
TRAVEDRAFT_109189
Heterochromatin formation proteins
Other heterochromatin formation proteins
TRAVEDRAFT_109189
Chromatin remodeling factors
NuRD complex
TRAVEDRAFT_109189
NuRF complex
TRAVEDRAFT_109189
NuRF complex (fruit fly)
TRAVEDRAFT_109189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
19406825
NCBI-ProteinID:
XP_008032666
JGI:
109189
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MQEELEDDLAAEEENKLINEEYKTWKKNAPYLYDVVITHALDWPSLTCQWFPDKESPANK
PYTVHRLLLGTHTSGQAQDYLQIATVHLPKRDDSGSADRLDRADYDDERGELGGHTIPPQ
PRIQIIQKINHEGEVNRARYMPQNPDLIATKAVSGEVLIFDRTKHSSEPERGGVCKPDIR
LVGQTKEGYGLAWSPLKAGHVLGASEDTTVCHWDINSYSKTKAVIEPTNVFRGHTSVVGD
VDWHATEDYTFASVGDDKMLMLWDTRDAAKPAAQLQAHDREILAVAFTPNVDFPHLILTG
SADKTIQLRDRRKLDVPVHIFEAHTDEVLHVAWSPHNPTVFASASSDRRVNVWDISQIGV
EQTPDDQEDGPPELLFVHGGHTARPTDFCWAPGEAESWSAGSTSEDNIVMIWQPTMRIWA
GDEVRIDEKELEGEAMEGIEIGDGETDADIAGPSASTA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggagctggaggatgaccttgccgcagaggaagagaacaagttgatcaacgag
gagtacaaaacttggaagaagaacgcaccatacctgtacgatgttgtcattacgcatgcg
cttgactggcccagtctgacgtgtcagtggttcccggacaaggagtcgcctgcgaacaag
ccctacactgtccaccggctgcttctcgggacgcacacgtccgggcaagcacaagactac
ctccagatcgccaccgtacaccttccgaagcgcgacgacagcgggtcagcagataggctt
gaccgtgcagactacgacgacgagcgcggcgagctcggtggtcacacaatccctccccag
ccccgcattcagattattcagaaaatcaatcatgagggcgaagtgaacagagcgcgttat
atgcctcagaatcctgacctcattgcaaccaaagcggtctccggtgaagtgctcatcttc
gacaggacgaagcattccagcgagccggaacgtggtggcgtgtgcaaacctgacatccgg
cttgtgggccagacaaaggaaggatacgggttggcttggagccctctcaaggccggtcat
gtcctgggcgcgtcggaggataccaccgtatgccattgggacatcaattcgtactcgaaa
accaaggccgtcatcgagccgactaatgtcttcagaggacacacgtctgtcgtaggagac
gtagattggcatgctaccgaagattacaccttcgccagtgtaggagacgataagatgttg
atgctctgggacactcgcgatgcggccaagcccgctgcgcaactacaagctcatgaccgg
gagatccttgcggtcgcgtttacaccaaatgtcgacttcccccacctcattctcaccggt
agtgctgacaagaccattcaattacgcgacaggcgtaagcttgacgtccctgttcacatc
ttcgaggcgcacacagacgaggtccttcacgtcgcatggtcaccacacaacccgaccgtg
tttgcctccgcatcgagtgaccgtagggtcaacgtctgggatatctcacagattggcgtc
gagcaaactccggatgaccaagaggatggcccgcctgaactcctcttcgtgcacggaggt
cacactgctcgcccgacggacttctgctgggcgcctggtgaggcagaaagctggtccgcc
ggcagcacctcggaggacaacatcgtcatgatttggcagcccactatgcggatatgggcg
ggagacgaggtcaggatcgacgaaaaggagctcgagggggaggctatggagggcatcgag
attggggatggtgagacggatgcggacatcgcaggaccttcggcatcgactgcttga
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integrated database retrieval system
