Trametes versicolor: TRAVEDRAFT_109911
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Entry
TRAVEDRAFT_109911 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
tvs
Trametes versicolor
Pathway
tvs03440
Homologous recombination
tvs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRAVEDRAFT_109911
03460 Fanconi anemia pathway
TRAVEDRAFT_109911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_109911
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_109911
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_109911
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
TRAVEDRAFT_109911
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
TRAVEDRAFT_109911
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
TRAVEDRAFT_109911
FA (Fanconi anemia) pathway
Downstream FA components
TRAVEDRAFT_109911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
TfoX_C
Motif
Other DBs
NCBI-GeneID:
19406876
NCBI-ProteinID:
XP_008032716
JGI:
109911
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MDGIDGLGGEGSGNGQGARIHATGGAIFSQKCVDWSSSPLINPSGSQERAADDDFFSAGT
GADASVASGSSINAAGQPPLPINGSGFASAATLHGRTAPPRPFTGFSSAAKLPARPQSRP
IHQPDERTTATPSAPSKFAGFGLASALPLQAADDQPPSPPPQQDYDSWFDSEASALPPDA
VGFKTARAILDTSEDAVEPPASQISQFGGFTSGLAKWKPASQASENEDTEADLARANVSS
GFTSAALVDPAAAPMVSFSTAAHILVGKTNWAAPSAEALARAAQKMKQWEAEIDLEEQPS
GAANTENNAPPNSHPPASRPPSLETPLRPVLRPMENGFSVMQPPDTPSPAGAAPKNPPHF
TVVAGMTIKNTPFKSPLMAKHQAQPRSVSAPSLYTGSPLNPERSTGFRAAPFVSPAKPGT
MPFASPMKASTSSLASPVKALGMTPRRLGFSSTAGKGKFASPFKPGLAPGDPGRSQLDLK
LKEEQARANSAAPVQIQVVGAPSSKGKERKDCQFFDLNPVPERQTLASSGLQPLSYTEDD
LEDMGINVEELRQMRPSNAVFYRFNSAVATVGIEDPAESEQLGPKAAFVHLKERGCDLVT
QEWVTTQYGLILWKLAGLVCLEPEREQNVKTKRWCWPEVIRQLLYRYERELVGGSRPALR
LVSTEDAPAACPMILCVSNIVILGTSPRAKNGTAYEPHPELEVTDGWYRLRANVDLPLAR
AIRRGRICIGSKLAISGAKLSGGRKEPCEILDAYDNTMLELTGNCTNLAPWHAKLGFVKQ
PFIATLDKLTPDGGNVPAMDLIITKTYPIAFLEFIKHEDGSTSKIGPRDEKEEMKAHDQW
LAKQEMESSKIRERLEADVQHLLKLAERLYSRAGPHFDLSFSRGDPMPDYIEGLYEKMME
QYLKPSQAWDRMDAFTAGWLHVYCKQQADLAMARLQDDLEKEMRDICPPRNVRDFRVVVA
KDARWHKKEAMRSVQITVWDPLKVVFTENGSPGEIKEGQRFLVTNLMPNQGNAWMTPAPG
AEVYLVAKRTSRWTNIKSAKC
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggacgggattgacggactgggaggcgaaggtagcggaaacggacaaggtgcgcgcata
catgcaacgggtggggccattttctcacaaaaatgcgtagactggtcctcctcgccgctc
atcaatccttcaggctcgcaagaacgtgctgcggacgatgatttcttcagcgccggcact
ggggcagatgcaagcgtagcgtctggctcttcaatcaatgctgcaggccagcctccccta
ccaattaacgggtccggttttgcctctgctgccacactccacggccgtaccgcgccgccc
cggccgttcactggattctcctccgctgccaaacttcccgcaaggccacaatcgcgtcct
attcatcagcccgatgagcgaactactgctacaccatctgccccgtccaaatttgcagga
tttggtctcgcatccgccctcccactccaagccgcagatgatcagccaccctccccacct
ccacagcaggactacgactcgtggttcgactccgaagcgtctgccctccctccggatgca
gtcgggttcaagacggcgcgggccatcttggacacctctgaggatgcggtggagccaccc
gctagccagatatcgcagtttggtggcttcacgtcgggtctggcgaaatggaagccagca
tctcaggcaagcgagaacgaagacacggaagcagatctagccagagcgaatgtgtcttcc
ggcttcacttctgctgccttagtagaccctgcggccgcaccgatggtcagtttcagtacc
gccgcacatatcctcgtgggtaagaccaattgggccgcaccatccgccgaggcacttgct
cgcgcagcacagaagatgaagcaatgggaggcggagattgaccttgaagaacaaccctca
ggtgcagcgaacacagagaataacgcgcccccgaactctcacccgcccgcttctcgtccg
ccatccctcgagaccccgctccgccctgtacttcgcccgatggagaacgggttctctgtc
atgcagcctcctgacacgccctcccctgcgggcgctgcgcccaagaatccgccgcacttt
accgtggtggcgggcatgaccatcaagaacacgcccttcaagtccccactgatggctaaa
catcaggcgcagccgcgctctgtctccgcgccctcgctctatacgggctctccgctaaac
ccggagcggtctactgggttcagagcggccccattcgtttcccctgcgaaaccagggacc
atgccgttcgcttcgccgatgaaagcgagcacgtcctcgcttgcctcaccggtgaaggcg
ctcgggatgactccgaggcggctggggttttcgagtaccgcaggaaagggcaagttcgca
tcgcccttcaagcctggcctcgcgccgggcgatccggggaggagccagttggacctaaag
ctgaaggaggagcaagcgcgggcgaacagtgctgctcctgtacaaatccaagtcgtgggt
gcgccatcgagcaaaggcaaagaaaggaaggattgtcagttcttcgacctcaatccggta
ccggagaggcaaacacttgcttcatctgggttgcaacccttgtcgtacacggaagacgac
ctagaagacatggggatcaacgtcgaagaactccggcagatgcgtcccagcaatgctgta
ttctacaggttcaattccgcagtggctacagtcggcatcgaagacccggcagaatccgag
cagcttggtcccaaggctgcgttcgtgcacctcaaggaacgcggctgcgatctagtgacc
caggagtgggtcacaacccaatacgggctgatattgtggaaacttgcgggactggtctgt
ctggagcctgaacgcgaacagaatgtgaagacgaagaggtggtgctggcctgaagtgatc
cgccaactcttgtacagatatgagcgcgagcttgtcggcgggtcccgcccagcactccgc
ttggtctcgactgaggacgctcctgcggcttgccctatgatcctttgtgtatccaacatc
gtcatcctgggtacctccccgagggccaagaacggcacagcctacgagccacatcccgaa
ctagaagtcacagatggttggtatcgattgcgagcgaacgtcgatttaccgctggcgcga
gcgatccgcagaggacggatttgcattggatcgaagctagccatctcgggggcgaagctg
tccggagggcgtaaagagccttgcgagatcttggatgcgtatgacaacactatgctcgag
ctgacgggtaactgtacgaacctggcgccgtggcacgccaagctaggctttgtgaagcaa
cctttcatcgcgactctggacaagttgactccggatggcggaaatgttcctgctatggat
cttatcatcacgaagacctaccccatcgcattcctggaattcatcaagcatgaggacggg
tccacatcgaagatagggccacgagacgagaaagaggagatgaaggcacacgatcagtgg
ctggcgaaacaggagatggaatcctccaagatcagggaaaggctggaggccgatgtacag
cacctcctgaagctcgctgagcggctgtactcccgtgccggtccccatttcgacctcagc
ttcagccgaggcgacccgatgcctgattacatcgaaggcctttacgagaaaatgatggaa
caatacctcaaaccatcccaagcgtgggaccgaatggacgcgttcacggcgggttggctt
cacgtctactgcaagcagcaagccgacttggctatggcgcggcttcaagatgatctggag
aaagagatgcgggatatatgtccgccgaggaatgtgagggacttccgtgtcgtcgtcgcg
aaggacgcacggtggcacaagaaggaagcgatgcgtagtgtgcagatcacggtatgggat
ccgctcaaggtggtgttcaccgagaacgggagtcccggagaaatcaaggagggccaaagg
ttcttggtcaccaatctcatgccgaaccaaggcaatgcgtggatgactcccgccccgggc
gcggaggtgtatctcgtggcgaagcgcacttcaaggtggacgaatatcaagtcggcgaag
tgctag
DBGET
integrated database retrieval system
