Trametes versicolor: TRAVEDRAFT_113186
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Entry
TRAVEDRAFT_113186 CDS
T04795
Name
(RefSeq) CORVET complex membrane-binding subunit VPS8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tvs
Trametes versicolor
Pathway
tvs04138
Autophagy - yeast
tvs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
TRAVEDRAFT_113186
04148 Efferocytosis
TRAVEDRAFT_113186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvs04131
]
TRAVEDRAFT_113186
Membrane trafficking [BR:
tvs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
TRAVEDRAFT_113186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
TPR_VPS8_2
Beta-prop_VPS8
VPS8_N
ANAPC4_WD40
WD40_CDC20-Fz
zf_RING_Vps8
WD40
Motif
Other DBs
NCBI-GeneID:
19407118
NCBI-ProteinID:
XP_008034155
JGI:
113186
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MYAFSLADQSFVEKSVGAVTALALSFDHTYIAVGHATGHIQLYDLRSPKVPARVVPPTTL
ASVASGRQEGHIVGSRIVSIGFVAGRHTALVSADDSGLAFYHSLGKVFFVDATDILRILG
KYPDEDAPDAPPALGHRFRRRRGRKPTTILSMVPLPLGTCAHPTDSYNLVALLTPIKLVI
VGLKPSPKTWYRRHRETDEEVASKSRFKGTLAWFPSISLTADLASASERDSKKSQVNGTH
PSSTPTLAYSWGETLHLLRVSEDKVTQSTKDAKTGKVSKVEVGRIVFEEMGSWTASDDIL
ALQWLNVNQIIVLTPTAFEIYDVRTFKLVEREHFDAWTLVSPVLSHTTNGSLTYSDAVSE
VAHSVRMYKGKIFLLGQHGVQVGTLLTWADRILSFVSEGDFLSAIDLTRSYYVGEAPGNR
NGLPDDPEKLKAVVGQKLRELIVASARYAFSEDRMLDGTHVTPDGRGVDRTDLFEGLVST
CARASMALDDFDFFFEDLFGYYDNNGIATIFLRQLEPFMLSGEIRHVPPRITQRLVALHD
AENRPDLVERLIWHIDPDCLDINQAIMLCQRHNLYDALIYVYTRALRDYVSPVVELLGLI
RRVQQWRRQRAEASPTSSSFMDEQSIEPVVLNAYKIYPFIADTLTGLTYPSEEPLPEDEA
LEAKFEVYKFLFYGRSSVWPEGEGGKLVLTSDEENGVEPTYPYARLLLRFDPEAFLHTLD
MAFEDAYLNDDTRGVSRFVIVKILLDILASPELAQEERTFIHIFVARNVPKYPQFIQIQP
TVLHNILIGLAEDPDTSTREDRQLAAEFLLSAYNPHESGRILELFKHAGFYRILRSLYNQ
EKQWPELLGTYLEDPALPSHDVFSSLHDVLKTAKRASKGKVPAAVSEKLLDSLPDLLVSD
IPNTAALVDEYVPDDHEAALNALGPNAEHERFLYLQYLLHPDRRKAAEDDIALPRKSVAS
PNVPPWLRQTYVSLHCRFEPTNVIPALRELPHGYLDGQEAARTCEENEVFDAVVWLVNHE
GDPQTALSKAESFDQRLSTRIADALASPDESAAAISDSLGKLQAVAEAATATCVERSQPP
SPEVPVEDLWFQLLSSQIDCVQRVASCCSLEALGPSEGAPADDPRVQREHDAISSLRSLV
HKTFTALMSVSSTRAVSFPRLFKRLVSSASAAKAHVSKGTLYTEFRTILTGMLESFRSEG
DMLVITKHLVDRDVFDTVAELVAERCKGWAPARGACSGCGVSFVGSKKAGEGEEPEPENE
KIVVSRTGAIYHSRCLPSDFHANHAVNVQ
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgtttagccttgctgaccagtcatttgtagagaagagcgtcggcgctgtgact
gccctcgcgttgtcattcgaccatacatacattgctgtcggtcacgctaccggccatatc
cagctgtacgacttgcgctcgccgaaggtgcccgctcgcgtggttcctcccaccacgttg
gcctccgtcgcgtctggcaggcaagagggccacatagtgggctcccggatcgtcagcatc
ggcttcgttgccggtcgccacacagccctcgtctccgcggatgacagtggtttggcattc
tatcacagtctggggaaggtattcttcgtggacgccacggatatattgcgcatcctcgga
aagtaccccgacgaagatgcccccgacgcgcctcccgcactcggccatcgcttccgccga
aggagaggccgcaagccgactactattctctctatggtcccgttgccgctcggtacatgc
gctcacccgacagacagctacaaccttgtcgctcttctcacgccgatcaaactcgtcatc
gtgggcctgaagccgtcgccaaagacctggtataggcgccatcgagaaaccgacgaagaa
gtcgcttcgaagtctaggttcaaggggacgctcgcgtggttcccgagtatatcgctcacc
gccgatctcgcgtccgcttctgaacgggacagtaagaagagccaggtcaacggcacacat
ccgtcgtcgactccgacgcttgcatactcttggggagagactctgcacctgctccgcgtg
tccgaggataaagtcacccaaagtacaaaggatgccaagacgggcaaagttagcaaagtc
gaagtcgggaggatcgtgttcgaggagatgggtagttggacagccagtgacgacatcctt
gctcttcagtggctgaatgtcaatcaaatcatcgtcctcacccccaccgccttcgaaatc
tacgacgtccgaactttcaaactcgtcgagcgcgaacacttcgacgcgtggaccctcgtc
tcccctgttcttagccatacgacgaacggctcgctcacatactcggatgcggtgtctgaa
gtcgcgcacagcgtacgtatgtacaagggcaagatcttccttctcggacaacacggggtg
caggtagggacgctcctcacctgggcggatcgtatcctgtcattcgtctccgagggcgac
ttcctgagtgccatcgacctcactcgatcctactacgtgggagaggcgcctgggaatcgg
aatggtctacctgacgacccggagaagttgaaggccgtcgtcggacagaagctacgcgag
ctcatcgtggcatccgcccgatacgcgttttcggaagaccggatgctggacggtacacac
gttacgccggacgggaggggcgtcgaccgaaccgaccttttcgaaggccttgtgtcgaca
tgtgctcgtgcttccatggcgctggacgatttcgacttcttcttcgaggacctattcggg
tactacgacaacaacgggattgcgacgatcttcctccggcagctggagccgttcatgctg
agcggcgaaatccgacacgtcccgccacggatcactcagcgccttgtcgccttgcatgac
gcggagaaccggccagatctcgtcgagcggctcatttggcacatcgacccggattgtctg
gatatcaaccaggctatcatgctatgccagcgacacaacctctatgacgccctcatctac
gtctacacgcgcgcccttcgagactatgtgtcacccgtagtggaacttcttggtctcatc
cgccgggtgcagcaatggcggagacagcgcgcggaagcttcgcctacctcttccagcttc
atggacgagcagtctatagaaccggtggtcctcaacgcgtacaagatctatcccttcata
gccgataccctgacaggtctcacatacccgtccgaagaacctctccccgaagacgaagca
cttgaagcaaagtttgaggtctacaagttcctgttctatgggcgatctagtgtttggccg
gagggcgagggcggaaaactcgtccttacctcagacgaagagaacggtgttgaacccaca
tatccctacgcccgtctgcttctccgcttcgacccggaagcgttcctacataccctggat
atggctttcgaggatgcgtatctgaacgacgacacccgcggcgtgagccggtttgtcata
gtcaagatcctccttgatatccttgcctctccagagcttgcccaggaagagaggaccttc
atccacatctttgttgcccgcaacgtgcccaagtacccccagttcatccagatccagccc
accgtgttgcacaatatcctcatcggtctagcagaggatccagatacgagcacacgggaa
gatcgccaactagccgccgagttcctcctctctgcctacaatccccatgagagcggccgc
atcctagagcttttcaagcacgccggtttctacaggatcctccgctccttatataatcag
gagaaacaatggccggagctcctaggaacctacttggaagacccagccttgccttcccac
gacgtattctcctctcttcacgacgtcctaaaaaccgctaagagagcgagcaagggcaag
gttcctgcggcagtttccgaaaagttacttgactctctacccgacctactggtctcagat
atccccaacacggccgctctcgtagacgagtatgttcctgatgaccacgaagctgccctc
aatgcgttaggtcccaacgccgagcacgagcgcttcctgtacctccagtacctgctgcac
ccggaccgtcggaaagccgccgaagacgatatcgcccttcctcggaagtccgtcgcctcc
cccaacgtccctccctggcttcggcagacctatgtttccctacactgtcgattcgagccc
acaaatgtcatccccgcactccgagaactcccacacgggtacctcgatggccaagaagcg
gcacggacgtgcgaggaaaacgaggtgtttgacgctgttgtttggcttgtcaaccacgaa
ggcgacccccagacggcgttatccaaagcagagtcgttcgaccaacgactgtctacacgc
atcgccgacgcactcgcgtctcctgacgagtccgcggccgccatatccgactccttgggc
aagctacaggccgtcgcagaggccgcgaccgcgacatgtgtggaacgctcccagccacct
tcccccgaagtccccgtcgaagacctctggttccagttgctcagcagccaaatcgactgc
gtccaacgcgtcgcgagctgctgctcactagaggctcttgggccttcggagggcgccccc
gcggacgatccccgcgtacagcgcgagcacgacgcgatatcttccctacggtcgctcgtc
cacaagacgttcaccgcgctcatgtccgtcagctccacgcgtgcggtttccttcccgcgc
ctgttcaagcgcctagtgagctccgcgtctgcggcgaaggcccacgtctcgaagggcaca
ctttacacggagttccggacgatcttgacaggcatgcttgagtcgttccgctcggaaggt
gatatgctcgtgatcacgaaacacctcgtcgatcgcgacgtgttcgacaccgtcgcagag
ctcgtcgcggagcgctgcaaggggtgggcgcccgcgcgcggggcgtgctcggggtgcggg
gtctcgttcgttgggagcaaaaaggcgggagagggtgaggagccggagccggagaacgag
aagatcgtcgtgtcacggacaggagcgatataccacagtagatgtttaccgtctgacttc
cacgctaatcacgccgtcaatgtacagtaa
DBGET
integrated database retrieval system
