Trametes versicolor: TRAVEDRAFT_114559
Help
Entry
TRAVEDRAFT_114559 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
tvs
Trametes versicolor
Pathway
tvs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
TRAVEDRAFT_114559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_114559
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_114559
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TRAVEDRAFT_114559
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
TRAVEDRAFT_114559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
19407227
NCBI-ProteinID:
XP_008034085
JGI:
114559
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MTQTTSLQYEAPWPVYALDWCKSPAPGQSLRPRSAFRLGIASLTDDYRNRIAIVGLQDER
VLVEDDYTEYPDFVTLVEAQHGYPATRLQWQPSTANSFAWSQKSANAELLATTGDALRVW
EYSSDGTGNVSAYVGRQGSGGGHKLTLKTALSGQSKVQNNNTGAPLTSFSWNEKSPSLVV
TSSIDTTCTVWNIDTSTAITQLIAHDREVYDVAWLPGSTDIFVSVGADGSLRAFDLRSLE
HSTILYETPAPKNMPPPTTTPSSTARPPTSPLLRIAFNPADSNYMSTFHMDGTEIQILDM
RSPGQPVMELKAHRSQVNALGWSSTDSQLLATAGDDSQLLLWDLAPHTQAAAASPRNAST
GLSSPRPDVKKRTITDPVMAYTGAGEIANLAWSPHIASMSMNTGHTTAPGEWIAIAMGKS
IKALKV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacacagaccacttctctccagtacgaggctccctggcctgtatatgctctcgactgg
tgcaagtcccccgcgcccggacagtcactacgcccccgctctgcgtttcgcctcggcatc
gcctcgctcacggatgactaccggaatcggatcgccatcgtcgggctccaagacgagcgg
gtactcgtcgaagacgactacaccgagtatcctgacttcgtcacccttgtcgaggcgcaa
cacggctatcccgctacgcggcttcaatggcaaccctcgaccgcgaacagttttgcatgg
agtcagaagtcggcaaacgcggagctcctcgccaccacgggcgatgctctcagggtgtgg
gagtactcgagcgatgggacggggaatgtcagtgcgtatgtcggtcggcaagggagcggc
ggcgggcacaagttgacactcaagacggcgctttctgggcaaagcaaagtccaaaataac
aacactggcgcaccattaacgagcttctcatggaacgagaagtcgcctagtctagtagtc
acctcctcgatcgacacgacttgcacagtgtggaacatcgacacctctacagcaatcacc
caactcatcgcccacgaccgtgaggtctacgacgtcgcatggctgcctggttcgaccgac
atcttcgtctccgtcggcgccgacggctcgcttcgggcatttgacctgcgcagtctggag
cactccaccattctctacgagaccccggcgccgaagaacatgcctccaccgacgaccacg
ccgtcctcgaccgcccgtccccctacctcccctctcctcaggatagccttcaatcctgcc
gactcgaactacatgtccacattccacatggacggcacggagatccaaattctggacatg
cgaagccccgggcagcccgtgatggagctcaaggcgcatcgctcacaagtgaacgcgctc
ggctggagttctaccgactcacagctgctcgctaccgcaggcgacgacagccagctgctg
ctctgggacctcgcgccgcacacgcaggccgcggcggcgtctccgcggaatgcgagcacg
ggcctgagctcgccgcggccggacgtgaagaagcggacgatcacggacccggtgatggcg
tacacgggcgcgggagagatcgcgaacctggcgtggtcgccgcacatcgcaagcatgtcg
atgaacacggggcacacgaccgcgccgggcgagtggatcgcgatcgcgatgggcaagtct
atcaaggcgctcaaggtgtag
DBGET
integrated database retrieval system