Trametes versicolor: TRAVEDRAFT_115246
Help
Entry
TRAVEDRAFT_115246 CDS
T04795
Name
(RefSeq) poly-A polymerase
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tvs
Trametes versicolor
Pathway
tvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRAVEDRAFT_115246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_115246
Enzymes [BR:
tvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
TRAVEDRAFT_115246
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
TRAVEDRAFT_115246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Polbeta
Motif
Other DBs
NCBI-GeneID:
19407282
NCBI-ProteinID:
XP_008035515
JGI:
115246
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MRYPSPTFARRRTPKYLGVTPPIAVAESTPREKEVTVTLLEELRRQGTFESEAEAKTREI
VLGRLAALVKKFVHQVSLSRGLSEAAATAAGGKIFTFGSYRLGVHGPGSDIDTLCVVPKH
VSREDFFDVFEDMLKETEGVIEVSGVPDAYVPIIKTKISGIPIDLVMARLALSTISDDLS
LQDDNLLRNLDERCVRSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGF
LGGVAWAMLVARICQLYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPK
LYPADRAHRMPIITPAYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKASWSDLFA
KHDFFHKYRYYLQVIASTGGPDVQIKWSGTVESRIRQLVMKLEYVESLALAHPFIKGFEQ
VSYCLTDEEVRAVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSVGP
RRLDISYPTTEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEGERQPRLAQKRPNT
KTTDRFNNTSPDVPNKKARLVQNTTAPFRHGCMLMLYRHSMSETSAVVPPHEALKNAENG
INSLPHINTATVVERPPSSAAAYKSPIKEPSQIKSPQLPRGENVAVATATVP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacccctcgccgacgttcgctcggcgcagaacacctaaatacttgggcgttacg
ccccccatcgctgtcgcagaatccacgccgcgcgagaaggaggttacggtgaccctcctc
gaggagctccgacggcaagggacttttgagagcgaggctgaagccaagacgagggagatc
gtcttaggacgcctagcagccctcgtcaagaaatttgtacaccaggtatcgctatcaaga
ggcctctccgaagccgctgccaccgccgctggggggaaaatcttcacgttcggctcatat
cgactaggcgtccacggccctggctcggatatcgacacgctatgtgtcgtgcccaagcac
gtttcacgagaggacttcttcgacgtattcgaggacatgctcaaggagacagaaggcgtg
atagaggtgtcgggtgtcccggacgcgtatgtcccgatcatcaagacgaagatctccggt
attccgatcgacttggtcatggcgcgcctcgcgctatcaaccatctcggacgacctgtca
ttgcaagacgacaatctgctccgtaacttggacgagcgatgcgtacgcagtctaaacggt
tcaagagtaacggatgaaattctgcggttagtccctaatgtgacggtattccgcaacgct
ctccgatgtatcaagctctgggcgcaacgacgagctatctactcgaacgtgaacgggttc
ctgggcggcgtagcatgggcgatgcttgtcgctcgaatatgccagttgtatcctaatgcc
atagcaggcgcgattgtcagcaggttcttcattatcatgtatcaatggacgtggccacaa
cctgtaatgttgaaacctatcgaagacggaccgctccccgtgcgggtatggaaccccaag
ttgtatcccgccgatagagcacaccgtatgcccatcatcacgccagcctatccttcaatg
tgcgccacgcacaacgtaactcagtccactcaaatgatcatgacggaggagttcaagaaa
gcgtccgacattgtggacaacatcatagtggggaaggcgagttggtctgacttattcgcc
aagcacgacttcttccacaaataccggtattacctgcaagtgatcgcttcgacaggtggc
ccggacgtacagatcaaatggtccggcactgttgagtcccggatacgacagctcgtcatg
aagctagaatacgtcgagagcttagcgctcgcccatccattcatcaaggggttcgagcaa
gtgtcatactgcctcaccgacgaggaagtacgagctgttgctcaaggagagatctccgag
gcgatcgccaagcgcaagaaagaggatatcgagggtgtggagggtgggagtgcggtctac
tcgacgactttctacatcggcctagtggtcgagcctcgacaacctggctctgttggtcct
cgacggttagatatctcgtatccgaccacggaattcaccaagctcgtcaagatgtgggag
aagtttgacgagaacaaaatgggcatcgttgtgcgacatatccgaagcgctatcttaccg
gactacgtcttcgacgagggcgagcgacaacctaggttggcacagaagcgcccaaataca
aagactaccgatcggttcaataacacgtcacccgacgtccccaacaagaaagcccggttg
gtccaaaatactactgcacctttccgtcacggctgtatgctcatgctatacagacattcc
atgtcagaaacatcggcggttgtacctccgcacgaagcgttgaaaaatgcggaaaacggt
atcaactccttgccgcacatcaacaccgccacggttgtagaacgcccaccgtcttctgct
gctgcctacaagtcgcccatcaaagagccttcacaaatcaagtcgcctcaactgccgaga
ggcgagaatgtcgctgtcgcaacggcgactgtaccatag
DBGET
integrated database retrieval system
