Trametes versicolor: TRAVEDRAFT_116078
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Entry
TRAVEDRAFT_116078 CDS
T04795
Name
(RefSeq) rRNA-binding endoribonuclease
KO
K11883
RNA-binding protein NOB1
Organism
tvs
Trametes versicolor
Pathway
tvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRAVEDRAFT_116078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_116078
03051 Proteasome [BR:
tvs03051
]
TRAVEDRAFT_116078
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
TRAVEDRAFT_116078
Proteasome [BR:
tvs03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
TRAVEDRAFT_116078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
19407343
NCBI-ProteinID:
XP_008035566
JGI:
116078
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAASTSSAATSGSKPACRHLVLDAGPLLSLSPLRGLSEAYYTVPQVLDELKDKRAREHFE
RLGLSAGVRIEMKGPSTASIAHVIQWAKKTGDYAVLSHPDICVLALTYELDQQEKEAAAK
AKAESDASGETSQTPEAESKQDTDESAPQAEEESPEGPLESDVGEVVEEVFSESEEVPPP
SESEEDDTEEDLEEREPLAVELQPIQGEIATPTEPSPSPLPTSEPPTASPPAEDAPVYDD
PSDEDDGEGEWITPSNVALHKSRALDLLPGEGAGRKGKKPQETIPVGCMTADFAMQNVLL
QMGLGLVGVEGKRIERVKSWVLRCHACFKICKDASRKFCPACGNPSLLRASVTISSPNAG
PNTPAMQVHLKKNLQFKTRGTVFSIPAPKPGSAKTGPGEGLILREDQTTYMRAKKHADGK
REREEKRMLNAATKSAEMGQGGTVVSSWMDPDWVPEILSTGTGGKGRSVRARGYDGDMPM
IGYGRKNPNERRRKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcgacgtcctcagcagcgacaagcggctccaagccagcatgtagacacctt
gtgctcgatgcgggacctcttctgtcgctttcgcccctccgcgggctgtcggaggcctac
tacaccgtgccccaggtcctggacgagctcaaggacaagcgggcacgggaacactttgaa
cggcttgggctgtcggcgggagtgaggatcgagatgaaggggccatccacagcatccatt
gcacatgtgatccagtgggcaaagaagacgggagactatgctgtgctctcgcatcccgat
atttgcgtcttggctttgacatatgaactggatcagcaagagaaggaggctgctgcgaaa
gcgaaggcggagagcgatgcgtctggagagactagccagacaccagaggcggaaagcaag
caggacacggacgaaagcgctccgcaggcagaggaggaaagccctgaggggcccctcgag
tccgatgtcggagaagtcgttgaagaggtcttctccgagtcagaagaagtgccccctccc
tctgagtcggaagaagacgacacggaagaagaccttgaagagagggaacctcttgccgta
gagctccagcccattcaaggcgagatcgccactcccaccgagccctctccttcacctcta
cccacctccgaacctcccaccgcatctccaccagccgaggacgcacctgtttacgatgat
ccttcagacgaggacgatggcgagggagagtggatcacaccctcaaatgtcgctctacac
aaatcccgcgcgcttgatctcctacccggagaaggtgccgggcggaagggaaagaaaccg
caagagaccatccctgtgggctgcatgaccgccgatttcgcgatgcagaacgtgctgctg
caaatgggtctcggtttggtcggcgtagagggcaaacgcatcgaacgcgtgaagagctgg
gtgctccggtgtcatgcctgcttcaaaatctgcaaagacgcatcacggaagttctgtcca
gcgtgcgggaacccgagtctgctccgcgcgtctgtcacgatctcctccccgaacgcgggc
ccgaacacgcccgcaatgcaggtgcacctcaaaaagaacttacagttcaagacgcgcggt
accgtcttctcgatccccgcacccaagcccggatccgcgaagaccggtcccggagagggt
ctcatcctgcgcgaggaccagacgacgtacatgcgtgcgaagaagcatgcggatgggaag
cgcgagcgggaggagaagcggatgctcaacgcggcgactaagagcgcagagatggggcaa
ggtggcacggtcgtgagcagctggatggacccggactgggtaccggagatcttgagcact
ggcaccggtggaaaggggaggagcgtgcgcgcgagggggtacgatggggacatgcctatg
atcgggtacgggaggaaaaacccgaacgagcggaggaggaagaagtga
DBGET
integrated database retrieval system
