Trametes versicolor: TRAVEDRAFT_116241
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Entry
TRAVEDRAFT_116241 CDS
T04795
Name
(RefSeq) RuvB-like helicase 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
tvs
Trametes versicolor
Pathway
tvs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRAVEDRAFT_116241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_116241
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvs03037
]
TRAVEDRAFT_116241
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRAVEDRAFT_116241
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
TRAVEDRAFT_116241
Chromatin remodeling factors
SRCAP complex
TRAVEDRAFT_116241
INO80 complex
TRAVEDRAFT_116241
INO80 complex (yeast)
TRAVEDRAFT_116241
SWR1 complex
TRAVEDRAFT_116241
ASTRA complex
TRAVEDRAFT_116241
Cilium and associated proteins [BR:
tvs03037
]
Motile cilia and associated proteins
Dynein assembly factors
TRAVEDRAFT_116241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_19
bpMoxR
AAA_28
IstB_IS21
AAA_18
Mg_chelatase
Cdc6_lid
AAA_33
AAA_7
Parvo_NS1
AAA_25
ResIII
nSTAND3
Zeta_toxin
ABC_tran
NPHP3_N
AAA_30
Rad17
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
19407360
NCBI-ProteinID:
XP_008035968
JGI:
116241
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MKASTAGASSSAPVAHNAVPPPPTASATRSSRIAPHSHIKGLGLNAEGYAASDGAGFIGQ
TEAREACGVVVDLVKSRKFSGRALLLVGPPGTGKTALALAISQELGAKVPFCPMVGSEVY
STEVKKTEVLAEAFRRAIGLRIKETKEVYEGEVTELTPTESENPLSGYGKTVSHVVIGLK
TVRGTKQLRLDPSIYEAILKEKIQVGDVIYVEQNTGAVKRVGRSDAYASSYDLESETYVP
LPKGDVHKRKELVQDVTLGDLDAANARPQGGQDIMSVMGSLVKSGRTEITEKLRREVNRV
VKGYVDQGVAEVVPGVVFIDEVHMLDIECFTYLNALLESPMAPTVVLATNRGNALVRGTT
DIYAPHGIPVDLLDRCLIVRTAPYEKDAIAKVVQLRANVEGLKLGDGVLERLAQKGHDSS
LRYALQLLTPASILASISGRKEIQLEDIDEMGELFLDAKTSADIISKHQSSEVS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatcgaccgcgggagcttcgtcctctgcaccagttgcgcacaatgcggtaccc
ccaccacctaccgcgtctgctacgcgctcttctcggattgccccacactcgcatatcaag
ggccttgggctgaatgctgaaggatacgccgcgtcggatggcgctgggttcattgggcag
actgaggcgcgcgaggcttgtggcgtggtcgtcgacctcgtcaagtcgcgcaaattctcc
gggcgcgcgctgctccttgtcggtccccccggaacaggaaagacagctctcgctctggct
atctctcaggagctgggcgcgaaggtgccgttctgtcccatggtcggttcggaggtgtac
agtacggaggtgaaaaagacggaagtccttgctgaggcgttccggcgcgcgattggtctt
cggataaaggagaccaaggaggtgtatgaaggagaggttacggagctgacgcccacggag
tcggaaaaccctcttagcgggtacggcaaaaccgtctcgcacgtagtcattggactcaaa
accgtccgcgggacgaagcagctgagactcgacccgagcatatacgaggccatcctgaag
gagaagatccaggtgggagacgtcatttatgtcgagcaaaatacgggcgcggtgaagcgc
gtgggtcgctcggacgcgtacgcctcctcgtacgacttggagtccgagacatatgtccct
ctgcccaagggcgacgtgcacaagcgcaaggagctcgtacaagacgtgacgctgggagac
cttgatgctgcaaacgcgcggccacaggggggacaggatatcatgagtgtgatgggtagt
ctggtgaagagcggtcgaactgagatcacggagaagcttcgtcgagaagtgaaccgtgtg
gtgaagggttacgttgaccaaggcgttgcggaggtcgtcccgggtgtggtattcatcgac
gaggtccacatgctggatatcgagtgcttcacttacctaaacgcgctcctggagtctcct
atggcaccaacggtagtactcgctaccaatcgcggaaacgctctggttcgtggtactacg
gacatctacgccccgcatggtattcctgtggatttgcttgaccggtgtctcatcgtgaga
accgcaccatacgagaaggatgcgattgccaaggttgttcaattgcgcgccaacgtggag
ggcctcaagctcggcgacggcgttctcgaacgcctagcccagaaagggcacgacagctca
ctaagatatgcactgcaactgctcacgcccgcgtcgatcctcgcgtcaatttctgggcgc
aaggagatccagctcgaagacatcgacgagatgggcgagcttttcttggatgccaagacg
agcgcagacatcatcagcaagcaccaaagcagcgaggtgtcatag
DBGET
integrated database retrieval system
