Trametes versicolor: TRAVEDRAFT_116703
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Entry
TRAVEDRAFT_116703 CDS
T04795
Name
(RefSeq) AP endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
tvs
Trametes versicolor
Pathway
tvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRAVEDRAFT_116703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_116703
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
TRAVEDRAFT_116703
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TRAVEDRAFT_116703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
19407392
NCBI-ProteinID:
XP_008035250
JGI:
116703
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAALRRSTRIATPTASTSLISSKDTANGRRARSPSGSSLSSLSSPFNLHADANPRPTKRA
RTGAAKDPATPLQEKQRRTKKGPIAEPKPDDFSVRATSAWKVGPHVSSAGGVENAIINAA
SVGANAFAIFLKSQRKWESDALKDESIAKFKERMKTFGYSPSHILPHGSYLVNLGNPDSE
KREKSFTCFLDDLKRCEQLGLHLYNFHPGSTVGAGTIEESLALIAECINRAHTETASVVI
VLENMCCVRRCQAGSGNVIGSRFSDLGGIIKQVSDKTRVGVCLDTCEFPYGYNITTLEGW
RYTPPRVVEEFEREVGAHYLRGMHLNDSKGALGSKKDRHENIGQGHLGLRTFAHILSDLR
TRDIPLVLETPAYDVPTGSSAAARESLATEGMGVWRTEVAVLNRLARRSAEEVGEEEIGE
MRAEIAEAVVKASKVRDAKGKKPVVGGKSGRKSKKKVEVEEEDDDDDSCCESAH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccgctctcagacgaagcacacgcattgctactccaaccgcctcgacatctctgatc
tcctcaaaggacactgcaaatggccgacgggctcgatctccctctggctcctctctcagc
tcgctgtcctcgccttttaatctccatgctgacgccaatcctcgccctaccaaacgcgcc
cgcacaggtgctgctaaagacccagcgacacccttgcaggaaaaacagcgtcggacaaaa
aagggtccgattgctgagcctaagcccgacgacttctccgtccgagcgactagtgcgtgg
aaggttggcccacacgtctcttcagccggcggcgtggagaacgctattatcaacgcggcc
tcagtgggtgcgaacgcgttcgccatcttcctcaaatctcagcggaaatgggagtccgac
gcgctcaaggacgagtcgatagcgaagttcaaagaacgcatgaagaccttcgggtactcg
ccctcgcatatcctcccgcacggcagctacctcgtaaatttgggcaatcccgatagtgag
aagcgcgaaaagtcctttacgtgtttcctggacgacttgaagcgttgcgagcagttaggg
ctgcatctatacaacttccacccgggctctaccgtcggcgctgggaccatagaagagtcc
cttgcgctcatagctgagtgtatcaaccgtgcacacacggagacggccagcgtcgtcata
gtattggagaacatgtgttgcgtgcgtcgctgccaagcaggctcagggaacgtcatcggc
tcgcgattctcggacctgggtggcatcatcaagcaggtcagtgacaaaacccgagtaggc
gtctgtttggacacttgtgagttcccgtatgggtacaacatcaccacactcgaaggctgg
aggtacacgcccccacgcgtagtggaagaattcgagcgcgaggtaggcgcacattacctc
cgcggcatgcacctcaacgactccaagggcgcgctcggaagcaagaaagaccggcacgag
aacatcggccagggccacctgggcctccgcacgttcgcgcacatcctcagcgacctgcgc
acgcgcgacatcccgctcgtcctcgagacgcccgcatacgacgtgcccaccggatcgagc
gccgcggcgcgcgagagcctcgcgacggagggtatgggcgtgtggcgcaccgaggtcgcg
gtactcaaccgtttagctaggcgcagcgcggaggaggtgggggaggaggagataggggag
atgcgggcggagatcgcagaggcggtggtgaaggcgagtaaggtgcgagatgcgaagggg
aagaaaccagtggtgggcggcaagtctgggcggaagtcgaagaagaaagtcgaggtggaa
gaggaggatgatgatgatgatagttgttgtgaatccgcgcactga
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