Trametes versicolor: TRAVEDRAFT_119749
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Entry
TRAVEDRAFT_119749 CDS
T04795
Name
(RefSeq) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_119749
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_119749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_119749
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_119749
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_119749
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TRAVEDRAFT_119749
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRAVEDRAFT_119749
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TRAVEDRAFT_119749
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRAVEDRAFT_119749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
19407601
NCBI-ProteinID:
XP_008036738
JGI:
119749
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MKFFIDDLPIIFPYDRIYPEQYAYMCDLKRTLDATGHCLLEMPSGTGKTVSLLSLIVSYQ
QFYPTKRKLIYCSRTVPEIEKALAELKRLMDYRKEHAETEEQREKEASFYGIGLTSRKNL
CIHPEVSKEKKGKVVDARCRDLTNAAACQKGRENPGSVDLCDWHEELGKLEPGNLIPPGI
WTLADVLQHGRDNRVCPYFLVRRMMPFVDVIIYSFHYLLDPKVAEQVSKEITKDAIVVFD
EAHNIDNVCIESLSIDLTRPMLDSAARSVVRLGDKIDEIKKTDASKLQDEYMRLVEGLQE
ANDAEDAFVSNPVLPEDLLKEAIPGNIRKAEHFVAFLKRFVEYLKTRMRVLHVVAETPLS
FLQHLKDITYIERRPLRFCAERLQSLVRTLEVNRVDEFSSLQKVASFATLVATYEKGTLY
PLAFPYETEAATVPNPIFHLTCLDPAIAIKPVFERFSTVVITSGTLSPLDMYPKMLQFTP
VVQETYAMSLTRNSFLPLVITRGSDQVAISSRFEVRNDPAVVRNFGSILIEYSKIVPDGI
VAFFPSYLYMESIVAAWNDMGILNEVWKHKLIFVETPDANETSIALENYRRACDNGRGAV
LLSVARGKVSEGIDFDHNYGRAVIMFGVPYQYTESRILKARLEYLRDAYRIRESEFLGFD
AMRNAAQCVGRVLRGKTDWGLMVFADKRFARADKRAKLPRWINQYITETAANLSTDMALT
LSKQFMRVISQNPNENQTGISLWTLADVEKAQAKQRELALEQEAERRATAAKAAAAHGDD
GEDDDEYGDGGLDDAAVGALDLDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctttattgacgacctacctataatcttcccttatgaccgaatatatcccgaa
caatatgcgtacatgtgtgacctcaaacgtacgctcgatgcgacaggacactgtctgctc
gagatgccgtcagggaccgggaagacagtgtctttgctatctctcattgtatcatatcaa
cagttctaccctacgaaacggaaactaatttactgctcgcggacggtccctgagatcgag
aaagcccttgcggaactcaaacgtctgatggattaccgcaaagagcatgcggaaacggaa
gagcagcgagagaaggaagccagcttctacggcatcggcttgacaagtcggaaaaacctt
tgcatacatcccgaggtatcaaaagagaagaagggcaaggtggtcgatgctcgatgtcga
gacctcacaaacgccgccgcctgtcaaaaaggccgcgaaaatcctgggtctgtagacctt
tgcgactggcacgaggagctaggcaagttggagcctggcaacctgattcctccaggcatc
tggaccctcgccgacgtcctgcagcacggtcgggacaaccgtgtatgcccatacttcctc
gttcgtcgcatgatgccgtttgtggacgtgatcatctactccttccactacctgctcgat
ccgaaagtcgcggagcaggtgtccaaggagataaccaaggacgccatcgtcgtgttcgac
gaggcccacaacatcgataacgtgtgcattgaatcgctgagcatcgacctcacacggccg
atgcttgattcggctgcacgaagcgtcgtgcgactaggggacaagatcgacgaaattaag
aagaccgatgcgtccaaattgcaggacgaatacatgcgattagtcgaaggcctgcaggag
gccaacgacgcggaagacgcctttgtgtctaatcccgtgctcccggaggacctgttgaag
gaggcgatccctgggaacatccgcaaggctgaacatttcgtggcgttcctcaagcgcttc
gtcgagtacctaaagacccgcatgcgggtgctgcatgtcgtggcggagacgccgctctcg
tttctgcagcacctgaaggacattacgtacatcgagcggcggccgttacgtttctgcgcg
gagcgcctgcagtcgctagtgcgcaccctcgaggtcaaccgcgtagacgagttctcgtcc
ctgcagaaggtcgcgagctttgcaacgctcgtcgccacgtacgagaaaggcacgttatac
cctttagcctttccgtacgaaacggaggctgcgaccgtcccgaatccgattttccatctt
acctgcctggaccccgccatcgcgatcaagccggtgttcgagcggttcagcacggtcgtc
atcacctcagggacgctctcgccgctcgacatgtacccgaagatgctgcagttcaccccg
gtcgtccaggagacgtacgccatgtcgctcacgcgcaactcgttcctgccgctcgtcatc
acgcgcgggagcgaccaggtcgcgatcagctcgcggttcgaggtgcggaacgaccccgcg
gtcgtgcgcaacttcgggagcatcctcatcgagtacagcaagatcgtgccggacggcatc
gtcgcgttcttcccgagctacctgtacatggagtccatcgtcgccgcgtggaacgacatg
ggcatcctgaacgaagtctggaagcacaagctgattttcgtcgaaaccccggacgcgaac
gagacgagcatcgcgcttgagaattaccgcagggcatgtgacaacggccgaggcgcagtg
ctgctgtctgtcgcccgtggcaaggtctccgaaggcatcgattttgatcacaattacggc
cgtgcggtcatcatgtttggcgtgccgtaccaatataccgagagccgaattctgaaggcg
cggttggagtacctcagagacgcgtaccgcatccgcgagtccgagttcctcggcttcgac
gcgatgcggaacgccgcacagtgcgtcgggcgtgtcctgcgcggtaagaccgactggggt
ctcatggtcttcgcagacaagcggttcgcgcgggcggacaagcgcgcgaagctgccgcgg
tggatcaaccagtacatcaccgaaacggcggcgaacctgtcgacggacatggcgctcacg
ctctcgaagcagttcatgcgcgtgatctcgcagaacccgaacgagaaccagacggggatc
tcgctctggacgctcgcggacgtcgagaaggcgcaggcgaagcagcgcgagctcgcgctc
gagcaggaggcggagcgccgcgcgaccgcagcgaaggcggcggcggcgcacggggacgac
ggggaggacgacgacgagtacggggacggggggctggacgacgcggcggtgggcgcgctg
gacctcgacgtatga
DBGET
integrated database retrieval system
