Trametes versicolor: TRAVEDRAFT_120900
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Entry
TRAVEDRAFT_120900 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_120900
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRAVEDRAFT_120900
Spliceosome [BR:
tvs03041
]
Complex C
Other components
Complex C specific factors
TRAVEDRAFT_120900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_30
nSTAND3
AAA_19
HA2_N
AAA_29
AAA_16
AAA_23
T2SSE
AAA_25
Cas3-like_C_2
B2
ResIII
Motif
Other DBs
NCBI-GeneID:
19407663
NCBI-ProteinID:
XP_008036932
JGI:
120900
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MASLQFWKPGTAGPGSNLDRATETEENVVQSAPTSSSLSLQAARERLPIFKHREGLLYAV
EKHGVTILVGQTGSGKTTQLPQFLYEAGWAAEGNRIACTQPRRVAATSVASRVAAEVGSI
LGDEVGYTIRFEDVSDKERTRILYMTDGMLFRETLVDPLLSRYSVIMIDEAHERSIYTDL
LLGILKKIRRKRPSLRLVVSSATLDATAFLEYFTAGNSPDEATIVSLEGRAYPVETAYLQ
EPVPDYVQKAAEVVWGIHLQQTPGDILVFLSGREEIDRCLELLAELLPTLPRNAKRLVLL
ALHAGLSTDEQLRVFEPAERGTRKVIISTNIAEASVTIEGIKYVVDSGFVKIRTYNPSTA
MSSLTTTPISQASATQRAGRAGRTAPGVCYRLYTERAFQQLRVTSPPEITRTDLTTPILQ
LKSLGIDDLMKFEWVSSPPAESVLRALEGLAHAGMVGEDGRLTVIGEKVAECPVEVNIAR
MLFASKDYQCGEEILTIAAMTTIQDVFVIPDGAPGAIAELERRKFTAEEGDHLTLLNAYN
GFSRYGRSASWCKAHALSFRAMSRAISIRSQLKKYMQRFGLPLESCEGDAKRLRKCLVTG
YWRNVARWVADGTYRAVRGETVLHVHPHSVLFTRKPRSGWVIFHEMEETKKTQIRILTEI
EPDW
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccttacagttctggaagcctggaacagctggacctgggagcaacctcgacaga
gccacggaaactgaagagaacgtcgtccaaagcgctcctacatcatcttcgctatccctg
caggccgcaagggaacgtctgccgatcttcaagcacagggaggggttgctttatgccgtg
gagaagcatggcgtaacaatcttggttggccaaactggcagcggaaagacaacgcaatta
ccccaatttttgtacgaagccggctgggcggcggagggcaaccgcatcgcgtgtacgcaa
cccagaagggtggccgctacctccgtagcaagcagggtggccgcggaagtagggtcaata
ttgggagacgaggtcggttacaccattcggttcgaggatgtcagtgacaaggagcgcact
cgaattctgtatatgaccgacggtatgctcttccgcgaaacgctcgtcgacccgctactc
agtcgatatagcgtcatcatgatcgacgaggcgcacgaaagaagcatttatacggatttg
ctcttgggcatcctgaaaaagatacggcggaagcgaccatctctcagactggtggtgtca
tcggcaacccttgacgctactgcattcctcgagtacttcacggccggaaacagccctgac
gaggcgactattgtcagcctggagggccgtgcctatcccgtggaaaccgcctaccttcaa
gagcctgtcccagattatgtgcagaaagctgcagaagtagtatggggcatccatctccaa
caaacgcccggtgatatcctcgtgtttctcagtggccgtgaggagatagaccgttgtctg
gagctactcgccgagttactgccaacccttccccggaatgccaagcgtctcgtcttactc
gcgctccacgcgggcttaagtacagatgaacaactcagagtgtttgagcccgcagaacgc
ggcactcgcaaagtcatcatatcaaccaacatcgccgaggcgagcgtgaccatagaaggc
ataaaatatgtcgtcgactcggggtttgtgaagattcggacctataatccctccaccgcg
atgtcgtctctaacgacaacaccgatctctcaagcctctgctacccagcgagcaggacgc
gcgggtcgtacagctccaggggtctgctaccgcttgtacacagagcgcgctttccagcaa
ttgcgcgtgacaagccccccggagatcactcggactgacctcaccacccccatactccag
ctgaagtccctcggtatcgatgatctcatgaaattcgaatgggtctcctcgcctcctgcc
gagagcgtgcttcgcgcccttgaaggactcgcgcacgcaggtatggttggtgaggacggg
agactgacggtcatcggcgagaaagtggcggagtgtccggtggaagtcaatatcgcacga
atgctattcgcctctaaagactaccagtgcggagaagagattctcacaatagctgccatg
acgacaatccaggacgtcttcgtcatcccagatggggcgcctggtgcaattgcagagctg
gaacgacgaaagttcacggccgaagaaggtgaccaccttactctcttaaacgcatacaac
ggtttcagccgttacggccggtcggcttcatggtgcaaagcacacgccctttcttttcgc
gccatgtctcgtgcgatctccattcggtcacaactcaagaagtacatgcagaggtttggc
ttgcccttagagagttgcgaaggcgatgcgaaacgtctcaggaaatgcctcgtgacgggc
tattggcgcaacgttgcacgatgggtcgcagacggcacataccgcgctgtgaggggagag
accgtgcttcacgtccatccacattccgttctgttcacgcggaaaccgcggtcggggtgg
gtgatattccatgaaatggaagaaaccaagaagacacagatccgaatcctcaccgagatt
gaacccgactggtaa
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integrated database retrieval system
