Trametes versicolor: TRAVEDRAFT_120915
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Entry
TRAVEDRAFT_120915 CDS
T04795
Name
(RefSeq) TBP-domain-containing protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_120915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvs03000
]
TRAVEDRAFT_120915
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_120915
Transcription factors [BR:
tvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
TRAVEDRAFT_120915
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TRAVEDRAFT_120915
RNA polymerase III system
TFIIIB
TRAVEDRAFT_120915
RNA polymerase I system
SL1/TIF-1B
TRAVEDRAFT_120915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
19407667
NCBI-ProteinID:
XP_008036998
JGI:
120915
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MSFALPSRQVTFGRPAAQTQQYQQSQPQPYGQSQPQPQQANGLALPYPSSSYLPGPSSLA
LPGPSATQYSSQPQPAQSQQQQSQQPTQSQSQTVVGSSQPIAGPSSPPSTVPATPAPLTL
EQQHITAVEGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTT
ALIFASGKMVVTGAKSEDDSRLASRKYARIVQKLGFDAKFSEFKIQNIVGSCDVKFPIRL
EGLAYSHGQFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYTAFNTIYT
VLCEFRKP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgcactcccctctcgccaggtcaccttcggtcgccccgctgcgcagacccag
cagtatcagcagagccagccccagccgtacggacaatcgcagccgcagccccagcaggcc
aacggcctagcgcttccctacccatcgagctcttacctccccggcccgtccagccttgct
ctccccggaccatccgcgactcagtattcctcccaaccacagcctgctcagtcacagcag
caacaatctcagcagccgacacagtcccaatcccagacggtggtcggcagcagccagccc
atcgctggtccctcctctcctccctctactgtcccggcgacgcctgcgccgctcacgctc
gagcagcagcacatcaccgccgtcgagggtatcgtccccacgctccagaacattgtcgcg
accgtgaacctggattgccgattggatttgaagacgattgcgctgcatgccaggaatgcg
gagtacaatcctaagcgttttgccgcggtcatcatgcgtatccgcgaccccaagaccacc
gcgctcatcttcgcgtcgggcaagatggtcgtcacgggtgcgaagtctgaagacgactcg
cggctggcgtcgcgcaagtacgcgcgtatcgtccagaagcttggcttcgacgccaagttc
tccgagttcaagattcagaacatcgtgggctcctgcgacgttaagttccccattcgtttg
gagggacttgcgtactcgcacggacagttcagctcttatgagcccgagctcttccctggc
ttgatctaccgtatgatcaagcctaaggttgtgctccttatcttcgtctctggcaagatc
gtgttgacgggtgctaaggtccgcgaggagatctacactgcgttcaacacgatctacacg
gtgctttgcgaattccgcaagccgtga
DBGET
integrated database retrieval system