Trametes versicolor: TRAVEDRAFT_125248
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Entry
TRAVEDRAFT_125248 CDS
T04795
Name
(RefSeq) pre-mRNA splicing factor
KO
K12817
pre-mRNA-splicing factor 18
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_125248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_125248
Spliceosome [BR:
tvs03041
]
Complex C
Other components
Step II factors
TRAVEDRAFT_125248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp18
PRP4
Motif
Other DBs
NCBI-GeneID:
19408009
NCBI-ProteinID:
XP_008039847
JGI:
125248
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MDTLKAEIAVKRKALAVPASEGARPTKYMRRGDLERLKEEQEKKEREEKEARLREERERE
EREREERRREKAAAKVKQAGSARRSSNSPHPEGGPSTGSPAPDSALSFNISNEETVRRLR
AKGQPIRLFAESDKDRRLRLRALELIEEKDHERHGGQNDFKKALEDVENVERQMKDRQVQ
DESTRDKGKKKDSEASLVSEILDLGLVKTDPDKLYPIIYYAMKRALKEWEQWMDERPENI
KRTTQGKLAAATQRQSAEYLKPLFKLLRARNLPPDVLARIAEIVHYMQKRQYQRANDSYL
RLSIGNAPWPIGVTMVGIHERSAREKISADQVAHVLNDEVSRKYIQSLKRILTFAQTKYP
PEDVTQLMG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctcaaggctgaaatcgcagtcaaacgcaaggcgctcgccgtccctgcatcg
gagggcgctcgtcccacaaagtacatgcgcagaggcgacctcgaacgcctcaaagaggag
caggagaagaaggagagagaggagaaggaggcgagactccgggaagagcgcgagcgcgag
gaacgcgaacgcgaagagcgcaggcgagagaaggcggcagcaaaggtgaaacaggctggt
agtgcacgcagatcctcgaactccccacacccagagggcggcccttcgaccggctcgccc
gcacctgactccgcgttgtcgttcaacatctccaacgaggagaccgttcggcgcctccgt
gcaaagggccagcccattcgactctttgctgagtccgacaaggaccgccgactgaggcta
cgcgcgttggagctcatcgaggagaaggatcatgagcggcacggtggccagaacgacttc
aagaaggcgcttgaggacgtggagaacgtcgagcgccagatgaaggacaggcaagtccag
gacgagtctacgcgcgacaagggcaagaagaaggattccgaggcatcattggtcagcgag
attctggacctcggacttgtgaagacggacccggacaagttgtaccccatcatctactac
gcgatgaagagagcgttgaaggaatgggagcaatggatggacgagcgccctgaaaatatc
aagcgtacgacgcagggcaagctggcggcagctacgcaacgccaatctgcggagtatcta
aagccactcttcaagctgttacgagcaaggaatctgcccccagacgtgcttgctagaatc
gccgaaatcgtgcactatatgcagaaacggcagtaccagagggcgaatgactcgtacctt
cgtttgtcgatcggcaatgctccgtggcccatcggcgttacgatggtcggtatacacgag
cggtccgctcgagagaagatttccgcagatcaggttgcgcatgtgcttaatgacgaagtc
agccggaagtacattcagagcttgaagaggatcctgacctttgctcaaacaaagtatcct
cctgaagatgtcacacagctgatgggatga
DBGET
integrated database retrieval system