Trametes versicolor: TRAVEDRAFT_125432
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Entry
TRAVEDRAFT_125432 CDS
T04795
Name
(RefSeq) DEAD-domain-containing protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_125432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_125432
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_125432
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRAVEDRAFT_125432
Spliceosome [BR:
tvs03041
]
Complex A
U1 snRNP components
U1 related factors
TRAVEDRAFT_125432
Complex B
TRAVEDRAFT_125432
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRAVEDRAFT_125432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
P-loop_SecA
REC1
DUF2443
Motif
Other DBs
NCBI-GeneID:
19408027
NCBI-ProteinID:
XP_008039863
JGI:
125432
LinkDB
All DBs
Position
Unknown
AA seq
494 aa
AA seq
DB search
MSNLGGGLHTVDWSSQKLAHFEKNFYVEDKRVSSRSDREIEEFRRLKEMKVQGRDIPRPV
TSFEEIGFPDYIMSTIRAQGFPSPTPIQCQAWPMALTGRDVVAIAQTGSGKTISFALPAM
LHINAQPLLAPGDGPIALILAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRD
LQRGVEIVIATPGRLIDMLESGKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDR
QTLMFSATWPKDVQKLANDFLKDFIQVNIGSMELTANHSITQIVEVVSDFEKRAKLIKHL
DQISQENAKVLIFVGTKRVADDITKYLRQDGWPALAIHGDKEQRERDWVLGEFKAGRSPI
LIATDVASRGLDVKDVRYVINYDFPNNCEDYIHRIGRTGRAGTTGTSFTYFTTDNAKQAR
ELIGILKEAKAVVPPQLEEMSMYGGGGGGRGRYGGGGRGRGGGGGGGRYGGGGGGGGGYG
GGGDSGYGSRGDRW
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctcggcggtggccttcacaccgtcgactggagctcgcaaaagctcgcccac
ttcgaaaagaacttctacgtcgaggacaagcgtgtctcttcgcgcagcgatcgcgagatc
gaggagttccgccgcctgaaggagatgaaggtccagggtcgcgacatcccccgtcccgtc
acctcgttcgaggagattgggttccccgactacatcatgagcactatccgcgctcagggc
ttcccctcgcctacccccatccagtgccaggcctggcccatggcgctcaccggtcgtgac
gtcgtcgccatcgcccagactggttcgggaaagactatttcattcgcactccccgccatg
ttgcatatcaatgcgcaaccactcctggctcctggtgatggtcctatcgctcttatcctt
gctcctacgcgtgagctggccgttcagatccagcaggagtgcacgaagtttggttccaac
tcccgcattcgtaacaccgccatctacggtggtgcccccaagggcccccagatccgtgat
ctccagcgtggtgttgagatcgtcatcgcgacccccggtcgcctgattgacatgcttgag
tctggcaaaaccaacctgcgccgtatcacctacctcgtcatggacgaggccgatcgtatg
ctggacatgggtttcgagccccagatccggaagattgtcagccagatccgccccgacagg
caaacgttgatgttcagcgccacctggcccaaggacgtccagaagctggctaacgacttc
ttgaaggacttcatccaggtcaacattgggtccatggagctcaccgcgaaccacagcatc
acccagatcgtcgaagtcgtcagcgacttcgagaagcgtgccaagctcattaagcatctc
gaccagatcagccaggagaacgcgaaggtgctcatcttcgttggtaccaagcgtgttgca
gacgacatcaccaagtacctccgtcaagatgggtggccagcgttggccatccacggagac
aaggagcagcgtgagcgtgattgggtcttgggcgagttcaaggcgggacgttcgcccatc
ttgattgctactgacgtagcatcacgtggacttgacgtgaaggacgtccgttatgtcatt
aactacgatttccccaacaactgcgaagactacatccatcgtatcggtcgtacagggcgt
gccggcactacgggaacgtcgttcacctacttcaccaccgacaacgccaagcaggcgcgt
gagctcatcggcatcttgaaggaggcgaaggctgttgtgcctcctcagctcgaagagatg
tccatgtacggtggtggcggcggcggacgcggtcgttacggaggtggcggtcgtggtcgt
ggtggaggtggaggtggtggtcgctacggcggtggtggaggcggcggcggaggctatggc
ggaggaggagacagcggctacggctcacgcggcgaccgctggtga
DBGET
integrated database retrieval system
