Trametes versicolor: TRAVEDRAFT_125854
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Entry
TRAVEDRAFT_125854 CDS
T04795
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
tvs
Trametes versicolor
Pathway
tvs00330
Arginine and proline metabolism
tvs00480
Glutathione metabolism
tvs01100
Metabolic pathways
tvs01110
Biosynthesis of secondary metabolites
tvs04148
Efferocytosis
Module
tvs_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
TRAVEDRAFT_125854
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TRAVEDRAFT_125854
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TRAVEDRAFT_125854
Enzymes [BR:
tvs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
TRAVEDRAFT_125854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
19408064
NCBI-ProteinID:
XP_008039945
JGI:
125854
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MNALHLDAAGEVDAERAFFVADLSSVYKQHQRWKKLLPEIEPFYAVKCNPDPYVLRLLAA
LGAGFDCASNGEIKQVTELGINPERIIFANPCKATSFIRSSAKAGVDMMTFDNTDELYKI
ARTHPGAKLIVRILTDDSKSLCRLGLKFGAPLVTVPALLAKARELKLDVIGVSFHVGSGC
YDPNAFSDAIMRARAAFDMGKAAGYEFNLLDVGGGFEDGTFDRTAAVLTEAIDDYFPQRD
HIRIIAEPGRYYVAKAFSLAANIVARRAPPAVENAPQELEVDPEQPSVMYYINDGVYGAF
NCIMFDHQTPQPYVLSLNGSFHVPASVPLRASSVWGPTCDSLDCVCPVTHLPALQVGDWL
GFENMGAYTTCAASQFNGFEISKVVYTTGAGAGAAEVREALRAFQG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctgcacctcgacgctgccggggaagttgatgcggagagggccttcttcgtc
gcggatctcagcagtgtctacaagcagcaccagcgatggaagaagcttcttcccgaaatt
gaaccgttctatgcggtgaaatgcaaccccgacccctacgtgctgcggctcctggctgcc
ctcggtgcgggctttgactgcgcgtcgaacggggagatcaaacaggtcactgagctcggt
atcaacccggagcgcatcatcttcgccaacccttgcaaggctacgtcgttcatccgtagc
tcggccaaggcgggcgtcgacatgatgacgttcgacaacaccgacgagctctacaagatc
gcgcgcactcatccgggtgcgaagctcatcgtgcgcattctcacggacgattcgaagagc
ctgtgccgcctcggcctcaagttcggcgccccgcttgtcaccgtcccagcgctgctcgcg
aaggcgcgtgaactgaagctcgatgtcatcggcgtcagcttccacgtcggaagcgggtgc
tacgacccgaacgcgttctccgacgccattatgcgcgctcgtgccgccttcgacatgggc
aaggccgctggctacgagttcaacctgctcgatgtcggtggcggcttcgaggacgggacg
ttcgaccggacggccgctgttctcaccgaggctatcgacgactacttcccccagcgtgac
cacatccggatcatcgctgagccggggcggtactacgtcgcgaaggcgttcagcctggcc
gccaacatcgtcgcgcgtcgcgctccgccggccgttgagaacgccccacaggagctcgag
gtggacccggagcaaccgagcgtcatgtactacatcaacgacggggtatacggcgcgttc
aactgcatcatgttcgaccaccagacgccgcagccgtacgtgctctcgctcaacgggtcg
ttccacgtgcccgcgtcggtgccgctgcgcgcgagcagcgtgtggggtccgacgtgcgac
tcgctggactgcgtgtgcccggtgacccatctgcctgcgctccaggtcggggactggctc
gggttcgagaacatgggcgcgtacacgacgtgcgcggcgtcccagttcaacgggttcgaa
atcagcaaggttgtgtacacgaccggtgcgggtgcgggtgcagcggaggtgcgcgaggct
ctccgggcgttccagggttga
DBGET
integrated database retrieval system