Trametes versicolor: TRAVEDRAFT_126185
Help
Entry
TRAVEDRAFT_126185 CDS
T04795
Name
(RefSeq) SNF5-domain-containing protein
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_126185
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_126185
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
TRAVEDRAFT_126185
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
TRAVEDRAFT_126185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
19408090
NCBI-ProteinID:
XP_008039696
JGI:
126185
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MGPPPVHSSRQPIPSTPQALQSTYASRLRTGTTLLMQPILAPSSVAAVASRTSRRGGVVN
YTEPGSGDEFPDAGALESDDSDFVASGGTRQAVRAARVSSRAPVGSSVFHAGTGVGVAQV
AATPVREAQREKAELEQSYLGQVPPARFISAKAMPPTRHDYFPQTAVDAQAEKPTALIPI
RVEFETETHRIRDCFVWNLNESLITPETFARIFCTDLDLPLQPWTETIAAQIRAQIEDHE
AVASTYLGAEAEITAPEDETPGDEVNECRVILSVDVQIATHHLLDHIEWDLLSPLTPEEF
SVKLCTELGLAGESAPLISHAIHEEIVKHKRDAIEWGVIGGDAREAAADESTPGAERPRD
KSGQSLFKDKTGLGLAWGRAPKDGRGPKPLRSVWRDWAEAEEFRTRFEVLTAEEVERREL
ERERASRRLRRETSKFQSTARSRRR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgccccccgtacactcgtcgcgccagccgatcccgagcaccccgcaggcgctg
cagtcgacgtacgcgtcgcgcctgcgcacgggcacgacgctgctcatgcagccgatcctc
gcgccgtcgtcggtcgcggccgtcgcgtcgcgcacgtcgcgccgcgggggcgtcgtgaac
tacacggagccgggctcgggcgacgagttccccgacgcgggcgcgctggagtcggacgac
tcggacttcgtcgcgagcggcgggacgcgccaggcggtaagggcggcgcgggtgtcgagt
cgggcgccggtgggcagctcggtgttccacgcgggcacgggtgtgggcgtcgcccaggtc
gcggccacgcctgtccgggaggcgcaaagggagaaggcggagctggagcagagttatttg
ggccaggtgcctcctgctaggtttatatctgcgaaggcgatgccgccgacgaggcatgat
tacttcccacagacagcagtagacgcacaagcagaaaaaccgacggcactcatccctata
cgcgtcgagttcgagacggagacgcaccggatacgcgattgcttcgtgtggaacttgaac
gagtcgctcatcaccccagaaacgttcgcgcggattttctgcacggacctcgacctgcct
ttgcagccatggacagaaacgatcgccgcacaaatacgagcgcagattgaagaccatgaa
gctgtcgcgtctacatatctcggtgcagaggccgaaataacagcgccggaggacgagact
cccggcgacgaagtcaacgaatgccgtgtcattctcagtgttgacgtgcaaatcgcaacc
caccacctactagaccacatcgagtgggacctgctctccccgctcacgcccgaagagttc
tctgtcaagctctgcacagagctcgggctcgccggagagtccgccccgctcatctcgcac
gctatccacgaagagatcgtaaaacacaagcgcgacgcgatcgagtggggcgtcatcggc
ggcgacgcgcgcgaggccgcggcggacgagagcacgcccggggcggagcgcccgcgcgac
aagagcgggcagagcctgttcaaggacaagacggggcttgggttggcgtgggggcgcgcc
ccgaaggatgggcgcgggccgaaaccgctcagaagcgtgtggcgcgactgggcggaggcg
gaggagttcaggacgcggttcgaggtgctcacggccgaggaggtcgagcggagggagctc
gagagggagcgtgcgagtcggcggcttcgtcgggaaacgtcgaagttccagtctacggct
cggtcaaggaggaggtga
DBGET
integrated database retrieval system
