Trametes versicolor: TRAVEDRAFT_127825
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Entry
TRAVEDRAFT_127825 CDS
T04795
Name
(RefSeq) SWI/SNF complex 60 kDa subunit
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tvs
Trametes versicolor
Pathway
tvs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRAVEDRAFT_127825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_127825
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_127825
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TRAVEDRAFT_127825
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TRAVEDRAFT_127825
PBAF complex
TRAVEDRAFT_127825
GBAF(ncBAF) complex
TRAVEDRAFT_127825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
19408232
NCBI-ProteinID:
XP_008040737
JGI:
127825
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MEGQKPAAKYALSSSYASHTLSQDPDARKRKITDKNLPNALLQSPEFAEDSAMYRDLLQM
ERKLDWTMTRKRVEVHDALQRIIPATRTLRIFLSHTVSGQAWQREGLEGDAAKPNLETGE
NIPAWQLKIDGRVLEIPNQRAKDRVPPRKFSTLIKHMIVELDRDTTLYPDGNIVEWIRSP
NQPAQDGFTIRRKGDTPTKVRIVMHLEQQPEQYKVHPELGNVLGVKEDSRTGVIQALWNY
IKTQNLQDKVDRRVVRADARLRPIFNADTAYFQHLPELVNRFLLPPDPIVLHYTLNPNLP
PPEKPSAWDVEVKVDDSNLKARMQHVVVSMAQDSARDLTKLDEEIALHIQSLNNAHMKRT
FLRGFADDPRGFVQTWLASQSRDLESVLASGASEGATVRQEDLKRTEFFRLPWVEEAVAI
QEGMRLASKSGI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagggccagaagcctgctgctaagtacgcgctgtcctcatcctacgcttcgcacact
cttagccaggacccggacgccaggaaacgcaagatcacagacaagaacctgccaaatgca
ctgctgcagtccccagagttcgccgaggattccgcgatgtaccgcgacctcctgcagatg
gagcgcaagctcgactggacgatgacgcgcaagcgcgtggaggtgcacgacgcgctgcag
cgtatcatccctgctacgcgcacgctgcggatattcctcagtcacaccgtctcaggtcag
gcctggcagcgcgaaggtctggagggtgacgcagcaaaaccgaacctggagacaggagag
aacattcccgcgtggcagctcaagatagatggtcgagtgctggagatcccaaaccagaga
gccaaagaccgcgtgccaccgcggaagttctctactctcatcaaacatatgattgtggaa
ctcgacagggacaccacgctctaccccgatggtaatatcgtggagtggatacgatctccc
aaccaaccagcgcaagatgggtttaccattcgtcggaaaggtgatacccccacgaaggtt
cggatagtgatgcatctggaacagcagccagagcaatacaaggttcatcctgaacttggc
aacgttctgggagtgaaggaggactctcgaacgggcgtgatccaggcattgtggaattac
atcaagacgcaaaatctccaggacaaggtcgaccgccgcgtcgttcgcgcggacgcgcgt
ctccgtccgatcttcaacgcggacactgcatacttccagcatctgccggagcttgtgaac
cggttcctgttgccccccgatcccatcgtgctccactacacactcaatcccaacctaccg
ccacctgagaaacccagcgcgtgggacgtcgaggtaaaggtcgacgactcgaacttgaag
gcgcgcatgcagcacgttgttgtgagcatggcgcaggactccgctcgcgaccttaccaaa
ctcgacgaggagatcgcactgcacatccagtcactcaacaacgcccacatgaagcgcacg
ttcctgcgcgggttcgcggacgacccccgcgggtttgtccagacgtggctcgcgtcacag
tcgcgcgacctcgagagcgtgctggcgagcggcgcgagcgaaggcgcgacggtgcgccag
gaggacctgaagcgcacggagttcttccggctgccctgggtcgaggaggcggtcgcgatc
caggagggcatgcggctggcgtcgaagtcgggtatttga
DBGET
integrated database retrieval system