Trametes versicolor: TRAVEDRAFT_129979
Help
Entry
TRAVEDRAFT_129979 CDS
T04795
Name
(RefSeq) scavenger mRNA decapping enzyme
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
tvs
Trametes versicolor
Pathway
tvs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRAVEDRAFT_129979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_129979
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
TRAVEDRAFT_129979
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
TRAVEDRAFT_129979
3'-5' decay
Other 3'-5' decay factors
TRAVEDRAFT_129979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS
DcpS_C
Motif
Other DBs
NCBI-GeneID:
19408381
NCBI-ProteinID:
XP_008041520
JGI:
129979
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MAKYDLAVLQRFRFERVLNEDPITHALTLLGTLPTGSAPADSDEHAPAIVRIEKTALTAG
QAEQLLSGSLRDAKLIEGTDIYTWLSGWLNASEDRPDVKINIVHPATEVHIRKYSQQEFS
IVHETPALYERIIKPYISAFPPSRTQWVENILTGASEADKILFRDPSPSAGYVLLPDMKW
DLTTLSSLYLVAIAFNRGIRSLRDLNKSHLPMLTSIRREAARVAKERWGLDHGSLRMFIH
YQPSYYHFHVHVVNVNYHGLPGMSAGQAHLLDDIISMIECDSDDGPSILQRMTLTYALGE
QHGLYEPLKAAQRELGFY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtacgatcttgctgtgctacaacgcttccgctttgagcgtgtcttgaacgaa
gatccaatcacgcacgcgctcaccctgctcgggacactgcccaccgggagcgctcccgcc
gactcggacgagcatgcgccggccatcgtgcggatcgagaagactgcgctcacagcgggt
caagcagagcaactgctctcgggctccctcagggatgcgaagttgatcgagggcaccgac
atctatacatggttgtcgggatggctgaatgcctcagaggacagaccggacgtgaaaatc
aacatcgtccaccctgctaccgaggttcacatacgaaagtactcccaacaagagttctcc
atcgtccacgagacgcctgcactatacgagagaataatcaagccatacatctccgcgttc
cccccatcgcgaacccaatgggttgagaacatcctgaccggcgcatccgaggccgacaag
atcctcttccgcgacccgtccccctccgcaggctacgtgctcttgcccgacatgaagtgg
gacctgaccacgctcagctcgctctacctcgtcgcgatcgccttcaaccgcggcatccgc
agccttcgcgacctcaacaagtcgcacctccccatgctcacgagcatccgccgtgaagcc
gcgcgcgtcgcgaaggagcgctggggacttgaccatgggtctctgcgcatgttcatccac
taccagccgtcctactatcacttccacgtacacgtcgtaaacgtcaactaccacggcctg
ccaggtatgtccgcaggacaggctcacctcctagacgacatcatctccatgatcgagtgc
gactcggacgacggcccgtcaatcctgcagcgcatgacgctcacctacgccctcggcgag
caacacgggctatacgagcccctaaaagcagcccaacgcgaactcggcttctactaa
DBGET
integrated database retrieval system
