Trametes versicolor: TRAVEDRAFT_130141
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Entry
TRAVEDRAFT_130141 CDS
T04795
Name
(RefSeq) Nrap protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tvs
Trametes versicolor
Pathway
tvs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRAVEDRAFT_130141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_130141
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRAVEDRAFT_130141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D3
Nrap
Nrap_D5
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
19408393
NCBI-ProteinID:
XP_008041602
JGI:
130141
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MGSGSDQDTEEGAWGGIEATPAHTAEAGPSKSHILKPPTGEELRKIKDASELFRSTSFKS
QIDAMLPNVRPKYDKSQPLDTLLLSIHKLLMELPAIAPQHPLHASRALSKQGIDVPYVRP
LPTEETNWKVSFEKPSEIMLAGSWITKTAVKAKDSAPFTVDLAVEMPSNLFQEKDYLNSR
VFQKRAYYLGVVASAIAKAKSTLRCELFYESVSGDPRRTCLVLRPEPDGSRKSSGKVPIH
VRIIPFISESPIPLQRLSPARSNIRATTLKDESKEEPTPLYNTAYMLMTTPRAHSLHIHA
LTKNVPSFVDALTLLRVWANQRGYGLGSRMCVRGFEGKGIWWASILDLMVNGEEPPPAGL
GKRGARRKPLGKGLSSYQLFKAALDFLARHNFGEEAVFVKSKDGHRFPPSSYSSHEAVFV
DATSSVNLLADVPLASLDTLRYDAQSTLELLDHASISEDTFAPLFLQEHRDVFARFDVVA
RVDLSSVEVRTVSAQHVADHGSAYNAAVAQLVSTLRQGLGDRAKSIAVLHASSDVRPTSQ
ALPTQSSVVHVGIILDSEHAFRLVDHGPPAEEQESERTRQFREFWGDKAELRRFKDGSIA
ESVVWDVKNADERARIPAMITHHLLARHFGLGADAVQTWQTEFDTLLKLPESISSLYQAS
SASVGFKSALSAFDALVKHFRALDEQFPLAVLNVSPASPALRYTDVFVPATLAIASRSAL
PKPTSYLPAMDIIIEFEKSARWPDDLRAIQKMKLAFFERLASILMHAVKGLQATVVLGAG
PARTEIADEAALDIITADGWAFRARIWHDREATLLDRIINDQPHVPKALRQAKTGEDARE
RQLALHARELYTRRFIHAPRHHRAIAALYHRFPAFSNTVRLTKRWLAAHWLLRGHVSEEA
VELLCAQVFLRTGPPSAADTAANTKTFAPGSKERGFAQVIAFLKDWEWAGGLDISLDNAD
QTARDAPAVVPPTTTAKDVAWALRTPFDPRGHMWTSAGPNAVVARRITALAKATWACLHA
LESGTSSVQALFHHPTDHYDFVIALNPALSTRAHQKLDADPSAWAPKGKYANARVQDAAA
SVMPAFDPVAMFYDDLSHVYADTVLLFHDAFGGDRIGAVWQPALRSARPFRALGGFSSTP
THKDAAKGKDKDKGLVVLNERALFAEVQRLGSTLVAGIAPQGTS
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaggcagtgaccaggacacggaagagggggcctggggtggaatcgaggccacg
ccggcgcacactgcagaggctggtccatctaagtcgcacatactgaaaccacctactgga
gaagagctcaggaagatcaaggacgcgtccgaactcttcaggtccacctcattcaagtcg
cagatcgacgctatgctcccaaacgtccgcccgaaatacgacaagtcacaaccgttggat
actctcctcttgtctattcacaagctcctcatggaactgcctgccatcgcacctcagcat
ccacttcatgcgtcaagagcgctctccaaacagggcatcgacgtgccctatgtgcgcccc
cttccgacggaagagaccaactggaaggtctctttcgagaagccctctgagataatgttg
gcaggcagctggatcacgaagactgccgtaaaggccaaggactccgctccattcacggtc
gatctcgcagtagagatgccttcgaatctatttcaggagaaagactatctcaacagccga
gtcttccaaaaacgcgcttactacctaggtgtcgtcgcttctgcgatagctaaggccaag
tccactcttcgctgtgagctcttctatgagtccgtctctggtgacccgcgcaggacctgc
cttgtgcttcgtccagaacctgacggctcgcgtaaaagttcgggcaaggtccctatacac
gtccgcattatccctttcatcagcgagtcgcccatcccgcttcagcggctatcccccgcg
cggtccaatattcgcgcaaccaccctcaaggatgagtccaaggaggagccgacgcccttg
tacaacactgcgtatatgctcatgaccacaccgagagctcactcgcttcacatacacgct
ttgacaaagaatgtgccttccttcgtcgatgcactcacactgctccgagtttgggcgaac
cagcgcggctacggtctagggagccgcatgtgtgtacgtggctttgagggcaagggcata
tggtgggcgtcgattttggatctcatggtcaacggcgaggagccgcctcctgcgggcctg
ggcaagaggggcgccagacgcaagcctttggggaagggtttgagctcgtatcagctcttt
aaggccgccttagatttcctcgcgcgacacaactttggcgaggaggctgtattcgtaaag
tcgaaggacggacatcggttccctcctagcagttattcgagccatgaagctgtcttcgtg
gatgcgacgtcgtcggtcaacctattggcggacgtcccgttggcttctctcgatacgcta
agatacgacgctcaatcaaccttggagcttttggaccacgcttctatatctgaagacact
ttcgcccctttgttcttgcaggagcaccgcgacgtattcgcacgtttcgacgtagtcgca
cgagtggacctgtcgtctgtggaggtgcgtacagtgtctgcgcaacatgttgccgatcat
ggctcggcctacaacgcagcagtcgcacaactcgtctccacgctgcgccaaggtctcggg
gatcgtgccaagtccatagccgtcctccatgcctcttcagacgtccggccgacgtcgcaa
gcgctcccgacacagtcatctgttgtgcacgttggaatcatcctggacagcgagcatgcc
ttccggctcgtcgaccacggtcctccagccgaggaacaagagagcgagaggacaagacag
ttccgcgagttctggggcgacaaggccgagctgaggcgcttcaaggacggctcaatcgcg
gagagcgtcgtgtgggacgtcaagaacgccgacgagcgcgcccgcattcccgccatgatc
acgcaccatctcctcgcgcgtcatttcggccttggggcggacgctgtacaaacttggcaa
accgaattcgacacgctgctgaagctgcccgagtcgatctcgtccctataccaggcttcg
agcgcgtcggtcggcttcaagtccgcgctctcggcgttcgatgcgctcgtcaagcatttc
agggcgctcgatgagcagtttcccctcgcggtgctcaacgtcagccccgcctcccccgca
cttcgatacaccgacgttttcgtccccgccacacttgccatcgcctcccgctcagcactc
ccgaagcccacttcgtatctccccgccatggacatcatcatcgagttcgagaagtccgcc
cggtggcccgacgacctgcgggcgatccagaagatgaagctcgcgttcttcgagcgcctc
gccagcatcctcatgcacgccgtcaagggcctccaggcgaccgtcgtgctcggcgcgggc
ccggcgcgcacggagatcgcggacgaggccgcactcgacatcatcaccgcggacggctgg
gcgttccgcgcgcgcatctggcacgaccgcgaggcgacgctcctcgaccgcatcatcaac
gaccagccgcacgtccccaaggccctgcgccaggcgaagactggcgaggacgcacgcgag
cgccagcttgctctgcatgcgcgcgagctgtatacgcgccggttcatccacgctccccgg
catcaccgcgcgatcgcggcgctctaccatcggttcccagcattttcgaacaccgtcagg
ctgacgaagcggtggcttgcggcccactggctgctgcgcggccatgtctcggaggaggcg
gtcgagctgctctgcgcacaggtgttcctgcgcacgggtccgccctccgccgcggacacc
gccgctaacacgaagacgttcgccccgggttcgaaggagcgcggcttcgcgcaggtcatc
gcgttcctgaaagactgggaatgggccggcggcctggatatctcgctggacaacgcggac
cagaccgcgcgcgacgccccggccgttgtgccccctacgaccaccgcgaaggacgtcgcg
tgggcgctgcggacgcccttcgacccgcgcgggcacatgtggacgtcggcgggcccaaac
gccgtcgtcgcacggcgcatcaccgcgctcgcgaaggcgacgtgggcgtgcctacacgcg
ctggagagcggcacctccagcgtgcaggccctcttccaccacccgacggaccactacgac
tttgtgatcgcgctcaacccggcgctctccacgcgcgcccaccagaagctcgacgccgac
ccgtccgcatgggcgccgaagggcaagtacgcgaacgcgcgcgtgcaggacgccgccgcg
tccgtcatgcccgccttcgaccccgtcgcgatgttctacgacgacctgtcgcatgtgtac
gcggacacggtcctcctcttccacgacgcctttgggggcgaccgcatcggggccgtctgg
cagcctgccctgcggagcgcgcggccgttccgcgcgctcggtggcttctctagcacgccg
acacacaaggatgcggcgaaggggaaggacaaggacaaggggctggtggtcctcaacgag
cgtgcgctctttgccgaagtgcagcggctgggcagcaccctcgttgcggggatcgcaccc
cagggcacatcgtag
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