Trametes versicolor: TRAVEDRAFT_136690
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Entry
TRAVEDRAFT_136690 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14300
nuclear pore complex protein Nup133
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_136690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_136690
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_136690
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRAVEDRAFT_136690
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TRAVEDRAFT_136690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
19408926
NCBI-ProteinID:
XP_008045276
JGI:
136690
UniProt:
R7S713
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MSPSPPRQGATRRTRAGSNQPQSRFSTPARRTGLAAVNDDESVMSGSGMDVDDESSEVVE
RGLRTDTVFSKSKEMTVTFYAQLPVEVKQALRSADFYRDAYTGDVDTLTGFAVVASLRTC
FVWKYSQALTGTPTCYIFGCPREPYPPPMATPFHALVPFGSQREPGLIVCSNIGQVRFWD
SIGMGLAGGDNFSFSVLSLVEGENVTNLVRADAQTFIASTSTGRLFRLLVTSSGGKYHLS
LHPFGRPQSNLQRLIPNFWSDPEQQPQPGFISAVAAEDLARDATGRLVWVLIDLRIQQWN
MSIEGWEKLLTEEDVSSQTRAALREHFPNAPESDVELDLELLDLKLQGPDDMVMLVSWAG
QDEEGVATELTTHPRRVYAIVYLRHLPGAYTVTNVRAVPYQSTSSSGAPMHPRLQIIVPE
KLIAIQFGDAVTICAQENEYMDRLELKSAMDRTLGLGVMKGDSEFLVLTAATMMKTTIDL
DEVATFSPETGRANLIKSTMTKAILYGSLSENPLHFSFPPEIDEEALMSGAQQLSEAILE
SDTEVVRAHHDLHAQMSGRKDRLSFLIKFINDNSALGKMSQRSRQTLAADAEKLYAAHQL
WLRHNDSLRAGHTDNVLHEAVYRYMNALGEGHHEDCLRAFLRLRVRDLGGLLPQVAELVR
RSSSEMGGKTAETIPQANQIALTILQSAHSYREYNLGVYGIVLPMINPWTSQIEIVDIVN
ELFQRTTLLVETPSGDSEAAESKKVPRQQLPELAACLFRCIQERLDWLGSPSAAEDSELK
RDLSQLEDRFRQLRPEALEVLRRNGFANEAFKLAEDYHDFRSLASLCHKGKVYPPEENPN
AARIETYIEKFKEAFTTELYQWYIEHGELRTMFAEGHNEYLDAFFAEHSHPGISWIHDLG
RGRYALASQALLTEAEHAPELVSKHLMLSMGKLSHLAQLHEGTKAINQDVLDAFHDGLDF
VSVHETLIDDLKSALASVRSRQSLEMQVETITQKKASNLSNRKALYNVFKFLVRQLLQGK
ALSVEDMAEILSLKDNYERVEDYTTALHLLARAENIPSTRRLSVFKNVWRRIYIHDDWNL
IRQTTGVSDQELNQRLRSTALYAALQAVVHKRGRPEGYKLTPADALDVPAEDELALRWPS
MSPEEATAIARDYQRDSRTLRDLDLDGIFLSMEQLVNADEGVPGSS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctcgccccctagacagggtgcaacaaggcgcacccgcgccgggagtaatcag
ccacagtcgcgcttctccacacctgcgcggcgaactggtctcgctgctgtcaacgatgat
gaatctgtcatgtctggctctgggatggatgttgacgacgaatcttcggaggtggtcgag
cgcgggctgagaacagacaccgtcttctccaagtcaaaagaaatgaccgttacgttttat
gcgcaactgcccgtggaagttaagcaggcattacggagtgctgatttttatagggatgca
tacacgggtgatgttgacaccctgaccggcttcgcggtggtcgcgtcattgcggacttgt
ttcgtgtggaagtatagccaggcgttgaccggaactcctacttgctatatattcggctgc
cctagggagccctacccgccgcccatggccacgcctttccatgcactcgttccgtttggc
tcccaaagagagcccggcctcattgtctgttccaatataggccaagtgcgcttctgggac
agtataggcatgggactcgccggaggcgacaacttctcgttttcagtattgtccctggtg
gaaggggagaatgttacgaacctcgtcagagcagatgcgcagacgttcattgcctcaacg
tctactggccgacttttccgtctactggtcacctcttctggcggcaaataccacctgtca
ctccatccatttggtcgtccacaatcaaacctacagcggctgattccaaacttttggtct
gacccagagcagcagccacaaccaggtttcatcagtgcagttgcggcggaggacctggct
cgtgacgctactggcaggctcgtgtgggtactcatcgacctgagaatacaacagtggaac
atgtccatcgaaggctgggagaagctattgacagaggaagacgtcagttcgcaaacccgg
gcagctctccgggaacactttcccaatgcgccagagagcgacgtggaattggaccttgaa
ctattggacctgaagctacaagggcctgacgacatggttatgctcgtctcatgggccggc
caggacgaagagggcgtcgctacggaactcacaacgcacccaagacgtgtctacgctatc
gtctacttgaggcatcttcccggtgcttataccgttacaaatgtccgagcagtgccgtat
cagagtacctcgagctctggcgcgccaatgcatcctaggctgcaaatcatcgttcccgag
aaactcatcgcaatccaatttggtgatgctgtgaccatctgtgcacaagagaatgagtac
atggaccgcctggagctgaagtctgccatggaccgtactttgggcctcggagtcatgaag
ggagacagcgagtttttggtcctcacggccgctaccatgatgaagactactatcgacctc
gacgaggtggccacgttctccccggagactggccgagccaacctcatcaagtctactatg
accaaagcgatcctgtatggttccctgtctgagaacccactacacttcagcttccctcct
gagatcgacgaggaagcgctgatgtccggtgcccagcagctcagtgaggccattttggag
tccgacactgaagttgttcgagcccatcacgacttgcacgcacagatgagtggccggaag
gacaggctaagcttcctcatcaaattcatcaacgacaactctgcgttggggaagatgtcc
caacgaagtcgtcagaccttagcggccgatgctgagaaactctatgcagctcaccagttg
tggttgcgacacaacgactccctccgggccggacacacggataatgttctccacgaagca
gtctaccggtacatgaatgcacttggggagggacaccacgaagactgtcttcgggcattc
ctgcggctgcgcgtacgagacctgggaggactcctaccgcaagtcgcagagctcgtccga
cgctcgtcgtccgagatgggcggcaagactgcggagaccatcccacaagcgaaccagatt
gcattgacgatcctgcaatccgctcacagctaccgcgagtacaacctgggtgtatacggc
atcgtcctccccatgatcaacccttggaccagccagatagaaatcgtcgacattgtcaac
gagctattccaacggaccactctactggtcgagacgccttctggcgactcggaggcggcg
gaaagcaagaaggtgcctaggcaacagcttcctgagctcgcagcgtgtttgttccggtgc
attcaggagcggctggattggttgggaagtcctagcgcagcggaggactccgaactgaag
agagacctttctcagttggaagataggttccgccaacttcgaccggaagccctggaagtg
ctcaggcgtaacggattcgcgaacgaggcattcaagctcgcagaagattaccacgacttc
cggagcttggcgtcgctctgccacaagggcaaggtgtatcctccagaggagaacccgaat
gcggcgcgcatcgagacatacatcgagaagttcaaggaggcgttcacgactgagctttac
cagtggtacattgaacatggcgagctgcgcacgatgtttgctgaggggcacaacgagtac
ctcgacgcgttctttgcggaacactcacaccctggtatctcatggatacacgacctcggg
cgaggccgttacgcattggcctcccaagctctgctcaccgaagccgagcatgcccctgag
ttggtgtcgaagcatcttatgctcagcatgggcaagctgtcgcacctcgcgcagctacat
gagggtaccaaagcaatcaaccaagatgttttggacgccttccatgacggcctcgacttc
gtgagcgtacacgagacgctgatcgacgacctcaagtctgcacttgcttcggtccgctcg
agacagtcgctcgagatgcaggttgaaacgatcacgcaaaagaaagctagtaacctcagc
aatcgtaaagccctctacaatgtcttcaagttcctggtacggcagttgctacaaggcaag
gctctctcagtcgaggacatggcggagatcctaagcctgaaggacaactatgagcgtgtc
gaagattacaccaccgcgttgcacctccttgcccgcgccgagaacatcccgagcacaaga
agactaagcgtcttcaagaacgtctggcgcaggatctacatccacgacgactggaacctg
atccgccaaacgacgggcgtgtccgaccaggagctcaaccagcgcctgcgcagcaccgcg
ctctacgccgcgctccaggcggtcgtgcacaagcgtgggcgcccagagggctacaagctc
actcctgccgatgcgctcgacgtgcccgcggaggacgagctcgcgctgcgctggccgagc
atgtcgcccgaggaggcgaccgcgattgcgcgcgactaccagcgcgacagccgcactttg
cgggatctcgacctggacgggatattcctgagcatggagcagctcgtgaatgcggacgag
ggtgttcccggcagctcgtag
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integrated database retrieval system
