Trametes versicolor: TRAVEDRAFT_136817
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Entry
TRAVEDRAFT_136817 CDS
T04795
Name
(RefSeq) DNA 5'-adenosine monophosphate hydrolase
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
tvs
Trametes versicolor
Pathway
tvs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRAVEDRAFT_136817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_136817
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
TRAVEDRAFT_136817
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
TRAVEDRAFT_136817
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
TRAVEDRAFT_136817
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
TRAVEDRAFT_136817
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
TRAVEDRAFT_136817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Zn_SUZ12
Zf-C2H2_ZNF451_C
zf-C2H2_2
DUF5955
zf-C2H2_4
zf-Di19
Motif
Other DBs
NCBI-GeneID:
19408932
NCBI-ProteinID:
XP_008045281
JGI:
136817
UniProt:
R7S6W4
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MPSPGGSYSQLRTYAMMDPLKIPDAIRLCHTDTSITIHDKWPKGMYHALVLPRVLPPYTM
HDLADLRTVLALPRAQAHALLLGLKRDALEAKKVIENEMELTHSFAWEIRMGFHALPSVE
HLHLHLISSDMIGEAFKTKKHMNSFHPKMGFFLDIDEVLRWFEPDIEPSWFAMVAALDKK
TYAPILKEDMRCPICEATHATVPKLRKHLTAHFQKMKDEATERELAKLMAMNYDDPNLLQ
VAPEPDEPTDAAAEGEGEADAAESSTSTENGLKRKHGEGDGPEVIDVDALPEPPQAKRQQ
VAAPSDS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcccaggcggctcctactcgcagctgcgcacctacgccatgatggacccgctc
aagatccccgacgccattcggctctgccacaccgacacctccatcacgatccacgacaag
tggccgaagggcatgtaccacgcgctggtcctcccgcgcgtcctgccgccctacaccatg
cacgacctcgcggacctgcgcaccgtgctcgcgctcccgcgcgcccaggcgcacgcgctg
ctcctgggcctgaaacgcgacgcgctcgaggcgaagaaggtcatcgagaacgagatggag
ctcacgcacagtttcgcgtgggagatccgcatgggcttccacgcgctgccctcggtggag
catttgcatttgcacctcatctcgagcgacatgatcggcgaggcgttcaagacgaagaag
cacatgaactcgttccatccgaagatgggcttctttctcgatattgacgaggtccttcgg
tggttcgagccggacatcgagccgtcctggttcgctatggtcgcagcgcttgacaagaaa
acgtatgcgcccatcctgaaagaggacatgcggtgccccatttgcgaggcaacacacgcg
accgtcccgaagctgcgcaagcacctcaccgcgcacttccagaagatgaaggacgaggcg
acggagcgcgagctcgcgaagctcatggctatgaactacgacgaccccaacctcctgcag
gtcgccccggagcctgatgagccaacggatgctgcggcggagggagagggagaggctgat
gctgctgagagcagcacctctacggaaaacggcttgaagcgcaagcatggcgagggcgat
gggccggaggtcattgacgttgatgccctgcccgagccgccgcaggcgaaaaggcagcaa
gttgcggctcccagtgactcgtaa
DBGET
integrated database retrieval system
