Trametes versicolor: TRAVEDRAFT_138552
Help
Entry
TRAVEDRAFT_138552 CDS
T04795
Name
(RefSeq) WD repeat-containing protein
KO
K24155
rabconnectin-3a
Organism
tvs
Trametes versicolor
Pathway
tvs04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
TRAVEDRAFT_138552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvs04131
]
TRAVEDRAFT_138552
Membrane trafficking [BR:
tvs04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
TRAVEDRAFT_138552
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
TRAVEDRAFT_138552
RAVE complex
TRAVEDRAFT_138552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
19409067
NCBI-ProteinID:
XP_008032706
JGI:
138552
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MLDLTQAYTGCPSSSLQFLHLPRETLLLYPFADSVVVLNARTLAFVRALAFWEVYPSTRH
LAQSVQCLAVENGMKLVVASLGHRVVAWSLSGTRNDYWRVHSSLLLPEDQQVTALNCVSG
LLAVGTRSTLSVYTLILENDLPTWSMKWSFTVPPLSRVRFSPSLMYIATTSLYDNVVHIY
LTTTGRKTQAIAHPRPVTDLVWRNSPCTTQHARYRDDPVLYTITTDATLRIFLPVLDAPQ
YLQLHSALDTFSSLPFSVASRETNSSIFRLDREVMNAALKSVLAQPQSAEEDGRRRRIRE
ITDEGWDVFLRVLGDGSLVVQAIANIDRRPPTLLKQFTLLQTAPGALPGPPAHLYIVPNP
GRASLTLVTSPPLKSYELAILPFFDARADGLRMIASGAEHADADAREDSRAEVVRFMRTP
NGEGVGALRSDGSGEAWNFDWARTGRLVRTGRWPASSGAERVDHFVVLDAGILLTLHTSP
PATLHVPLITSFFALSPPTHSSPQRTLIGVTASYTIVIISATISGATPSLSLLSESSLPL
PAPPKMILPVDPMAWVGQFGTGTRGAAQAHDVLLSVSEDGELAFWVPEGGLGDPWKCTGI
VRTGCKGLSMARCSSAKKSVLVVPTPDGAELTIWDSKESEFALGLEYRSLLSDAITDLDW
AATPDGQSLLAVGFAHRVELLCQQRATYFDQTPGWGVCWKVDVGAMVPHPISDSIWLARG
TLLVGAGHQLFMYGQRRGVEVEADAPKRQEESLFEHVARLNGPLDDYHPQMVLQCLLWEK
IQLVKGIIVNLARNVESRRDVHEWENLPADKFLQRDDEARATNASHRPKYSLLFDIPERN
DDDEDDPFNPTTVKKLIDRLEEQPLPHLTPSENASLLVLVQTALEIEEQRRALDSNGLRY
LISMRSFYILNRRASEPTTPASPSTGSPAPPQLQRRERLRYRDMIWAFHSDSQEVLLATS
MAACGGKMCWPDARALGVFTWMRSADAMRAHMEVVARNAYMAGDLRDPTACSLFYFALGK
VKLVHGLWRQAAWHKEYQVMLKFLNNDFKEPRWRTAALKNAFALLSKRRFEYAAAFFLLG
GSLKDAVNVCIKNMSDWQLAVALARVVEGGDDGPVLGDILNNTVIPLAFKNGNRYLASWA
FWLLHRRDLAVRILVTPLQDMASTVDAPIVEIGDPHYDDPSLALLFSQLKSKTLQTAQGT
SEISGRTEFNFVLQIARVFCRMGCHVLALDLVRSWFFQRPSTVVRDGRAARRPPSPVSTR
FALEPALRHKSSILIDIDVTTAPPTRRASPSRSPSRGGSPPRVAKEELTLKDEGDLVARK
AGIGSLMKSAKQDVKVPEFDMGAFF
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacctcactcaagcatacaccggctgcccgtcctccagcctgcagttccttcac
ctgcctcgcgagaccttgctgctatatccgttcgcggactccgtcgtcgtgctcaacgcg
cgcaccctagccttcgtccgcgccctggccttctgggaggtctatccttctacccgtcac
ctcgcccagtccgtgcagtgtctggccgttgagaatggcatgaaactggtcgtcgcatct
cttggccaccgtgtagtcgcatggtccttgtcaggcactcgaaatgattattggcgagta
cactcttcactcctccttcctgaagatcagcaggtcacagccctcaactgcgtgtctggt
ctgctcgcggtcgggacgcgatccactctttcagtgtataccctcatcctagagaatgac
ctccccacgtggtccatgaagtggtctttcactgtgcctcccctgtcccgcgtgcggttc
tcgccctctcttatgtacatcgccaccacttccctgtacgacaatgtggtccacatatac
ctcacaaccacaggccgcaaaactcaggccatagcacacccgcggccagtgacggacctt
gtctggcgcaactctccttgtaccactcaacatgcacgttatagggatgatccggtattg
tataccatcaccaccgacgcaacgttgcggatattcctccccgtcctagatgcaccccag
tatctccagctgcactccgcgcttgataccttttcatctctcccattctctgtagcctcg
cgggagacgaactccagcatcttccgcctcgatcgcgaggtcatgaacgctgccctcaaa
tccgttcttgcgcagccacaatccgcagaggaagacggccgtcgacggcgtatccgcgag
atcaccgatgaagggtgggacgtgttcttacgcgttttgggcgacggatcgctcgtcgtc
caagccatcgcgaacatcgaccgacgcccgcctaccctcctcaaacaatttactcttctc
caaaccgcccctggtgctctccccggccccccagcccacctctacattgtccccaacccc
ggccgggcgtcgctgacgctcgtcacctcaccaccactaaagtcttacgaactcgcgatc
ctccccttcttcgacgcacgcgcagacgggttgcgcatgatcgcgtccggagcggaacat
gcggacgcagacgcgcgggaggattcgcgcgcagaagtcgtccggttcatgcgcacgccg
aacggggagggcgttggtgcgctgcgctcggacggctctggggaggcttggaacttcgac
tgggcgcggacgggtaggctagtgcgcacggggcggtggccggcgagttcgggcgcggaa
cgcgtggatcatttcgtcgtactcgacgcaggtattctcctgaccctccacacctccccg
cccgcaaccctccatgtgcctttgataacgtccttcttcgctctctctccgcctacccac
tcgagccctcagcgcacgctcatcggcgtcaccgcgtcatatacgatcgtcatcatctcc
gcgaccatctctggagctacaccatccctctccctcctgtcagagtcgtcactacccctc
cccgcacctccaaagatgatccttcccgtcgacccaatggcatgggttggacaattcggc
acgggcacgcgaggcgctgcacaagcgcacgacgtgctcctgagcgtatcagaggacggg
gagctagcgttctgggtgccggagggcggacttggcgacccctggaaatgcacgggcatc
gtacgtacaggttgcaaagggctgagcatggcgcgctgcagctccgcgaagaagtccgtc
ctcgtggtcccaacccccgacggcgccgagctaacaatctgggattcgaaagagtccgag
ttcgcactcggactcgagtatcgctctttgctcagcgatgcgatcacggacctcgactgg
gccgcgacgcccgacgggcagtcgctcctcgccgtaggcttcgcccatcgtgtcgagctg
ctctgccagcagcgcgcgacatactttgaccagacgcccggatggggcgtttgctggaag
gtcgacgtcggcgcgatggtgccacatccgatcagcgactccatctggctcgcgcgtggc
acgcttctggttggggcgggccaccagctgttcatgtacgggcagcgacgcggtgtggag
gtagaggcggatgcgccgaagcgccaggaggagagcttgttcgagcatgtcgcgaggctg
aatggtccgctggacgactatcacccgcagatggtgctacaatgtcttctgtgggagaag
atccagctggtgaaaggcatcatcgtcaatctcgcgcgtaacgtcgagtctagacgcgat
gtccatgagtgggagaacctccccgcagataagttcttgcagagggacgatgaggcgagg
gcgacgaatgcctcgcacaggccaaagtattcgcttctgttcgacatccccgagcggaat
gatgacgacgaggatgaccccttcaacccgacaacggtgaaaaagctgatagaccgcctt
gaggagcagccactcccacatctgactccgagcgagaacgcatccctcctcgtgctcgtc
cagactgcgctcgagatcgaagagcaacgtcgcgcacttgactccaatggtctgcggtac
ctcatctccatgcggagcttctacattctcaaccggcgagcgtccgagccgaccacgcca
gcttccccatcgaccgggtcccctgcaccaccacaactgcagcgacgggagcgcctgcgc
taccgcgacatgatctgggcgttccacagcgacagccaggaggtgctcctcgcgacgtcg
atggcggcgtgcggcgggaagatgtgctggcccgacgctcgggcgctcggggtgttcacc
tggatgcggtccgcggatgctatgcgcgcacacatggaagtcgttgcgcggaacgcgtac
atggcgggcgacctgcgtgaccccacggcctgcagcttgttctacttcgcgctcgggaag
gtgaagctcgtgcacgggctgtggcggcaggcggcgtggcacaaggagtaccaggtgatg
ctcaagttcttgaacaacgacttcaaggagccccggtggcgcacggccgcgctcaagaac
gcgtttgcgctattgagtaaacgacggtttgagtacgccgctgcgttctttttgctcggt
ggaagtctcaaagacgcggtcaacgtatgtatcaagaacatgtccgattggcagctggcc
gtcgcgctcgcgcgcgtagtcgaaggcggagatgatggtcctgttcttggtgatatatta
aacaacaccgtcatcccgctcgcgttcaagaacggcaatcgttacctcgcaagttgggcg
ttctggctgctccaccgacgcgaccttgctgtccggatattagtgacacccctacaggat
atggcatccaccgtcgatgcgccgatagttgaaatcggagacccgcattacgacgacccc
agcctcgcgctgctgttctcgcagctcaaatcgaagacgcttcagacagcccaggggacg
agtgagatttccgggcggaccgagttcaacttcgtcctccaaattgcccgggtcttctgc
cgaatgggatgccacgtcctggcgctcgatctcgtccgctcgtggttcttccagcggccg
tctacagtcgtccgggatggccgcgcggctcgaagacctccaagtccggtatcgacgcgt
ttcgcgctcgagcccgcgctccgccacaagtcctcgatcctcatcgacatcgacgtcacg
actgcgccaccgacgcggcgcgcatcgccctcccgctcgccctcgcgcgggggctcgccg
cctcgtgtagcgaaggaggagctcacgctgaaggacgagggcgatctcgtggcgcggaag
gcgggtattggtagcctgatgaagtctgcgaagcaggatgtgaaagtgcccgagttcgac
atgggcgcgttcttctag
DBGET
integrated database retrieval system