Trametes versicolor: TRAVEDRAFT_138819
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Entry
TRAVEDRAFT_138819 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_138819
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
Other 90S particles
TRAVEDRAFT_138819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
TPR_19
UTP6_C
NRDE-2
RNase_II_C_S1
TPR_16
TPR_12
ARM_TT21_C
ARM_TT21_N
DUF4363
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
19409078
NCBI-ProteinID:
XP_008032782
JGI:
138819
LinkDB
All DBs
Position
Unknown
AA seq
1486 aa
AA seq
DB search
MAAGKKRVLDETSGSPKAKKTKTEKTAKKAREDAPKPAPTHSTLVADDIDFPRGGGTSLT
PLEVKTLRAEAAKEADSELFAESAKEATTKRRRKSEAGTKSKTTDKDGKKNVIRIEHLNY
KRVAVGMKILGQVVSVEPLALIVSLPNQLFAHVPITQISSQLTHILESEDDAENSDDEEE
EASASRVPDLFEIFQPGQYVRAVVSAVHQPGSTDATGLGRARDEVQKASRRVELSLVPEK
VNEGVAKADLLAGFALSASVKSVEDHGYILDLGIPEVSGFLSFKAAAQKGPSGAEKKFHV
GRLLDVIVTKLSDNGRTCNVSVDSYAPKTAPLTEVTSVKSVVPGALVQSLVTAVQPDGLI
LQVLGFFDGTVDQFHLRSGDTEDNYKIGQKVKARVLYDISPSTPPRFALSLADHVVKYSA
KSAASGSAATDLREAYPVGTTLDAVKVTRIESERGLTVEVGSGVAGFVHISQVSDEHVPT
LSTTSGAWKVGTVHRARVTGYFPLDGLLQLSLKPSILAQKFLQVADVQVGELIKGTVKKL
TDTALFVSISGNVDGVIWPNHYADIVLKHPQKRFKPGGSIKCRVLVVDSERKRIALTAKK
TLVESTLPIVSQLSDVRVGVVTHAVIFKISEKSLQVEFYNNLKASVPAREASETTLSSLS
AAFAIGKPVQVRLIAVDAETGRITASIRQAAPNFKSAITDISGVDIGDIVEGVVSDIRKD
KAVVTLQPTQVTALLSLNNLANRREVSVAQLRSALKVGEKLQDLVVTSRNPEKGFVLVAS
KPKEKEAILQKNHLSLDTVQAGQLVGGRVLRHNRYGALIKLTNSIMGVLHPTDAVDDYES
GKPFPGVDSVLKAVVLSVDKERRQLMLSTRMSRLFPSQDKPIVDREITSLSQLKVGDKVR
GFIKSIAEHGLFVTLGRDIDARVQIKELFDDFVKDWKSRFTVNQLVNGRILSVNVEKKQL
ELSFRSGDLKRDGQSQLSLSDLSEGQKIDGRVKKVEDYGLFIEIEGSKLSGLCHKSELSD
NKDGDVTLALRSFRVGDKVKAVILSVDLEKRRVSFGLKPSYFEEKDFEQESEAEEEVEPA
AALGVVVEDAEMSDNDNEDEDEDEEEDEEVAEAEGPEDDESADDEDEDGGDAAMDVDLTL
DLQRPSGSSAAASSSAPSAALNLADGFQWTVPNPEDDVEMESDDESDSGNEQEGKKKKRK
RKEIEQDLTADMHTKVPESNADFERLLLGSPNSSYLWIQYMSFQLQISEIDKAREIAKRG
LKTINFREEQEKLNVWIALLNLENIYGTDESLEAAFKDAARHNDSKTVHLRMAEIFEQSD
KSEKAEEQFKKTAKKFSQSSKVWTLYAEHYLKRGMLEEARKLLPRSLQSLEKRKHLKTIC
KFAQLEYKLGDPERGKTIFEGIVDSHSKRWDMWSIYLDMEAVQGDIMSLRNLFNRLLTLK
MTSHKAKSFFKKWLELERRLGDEEGQAAVKAKAIEWTQRAAGDAQS
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggaaagaagcgcgtcctggacgagacgtcaggcagtcctaaagccaagaag
acgaaaacagagaagacagcgaagaaagccagggaggatgcccccaaacctgcaccaaca
cactctacccttgtcgcagacgatatcgacttccctcgaggcggaggcactagcttgacg
cctcttgaggtcaagactctgcgggcggaagctgcgaaggaagcggattcggagcttttt
gcagaatctgccaaggaggccacgactaagcgtagacgaaagtctgaggccggtacgaag
tcaaagaccacggacaaggatggcaagaagaatgtgatccggatagaacaccttaactat
aagcgtgttgctgtcggcatgaagatactcggacaagtggtttccgtggaaccacttgcg
ctcatcgtatccctgccaaaccaactcttcgcccatgttcccatcactcaaatatccagt
cagctcactcacattctggagagtgaggatgatgcagagaactcggatgatgaagaggaa
gaagcctccgcatcgcgcgtaccagaccttttcgagatcttccagccaggccagtatgtc
cgggcggtggtaagtgcagtgcaccagccaggctccacggacgcgacaggtttggggcga
gcacgcgacgaggttcagaaagccagcaggcgcgtggagttgagccttgttccggagaag
gtcaacgaaggagtagcgaaggctgatctgctcgcgggattcgcactctccgcttccgtg
aagagcgtagaggaccacggatatattcttgaccttgggattcctgaggtctccgggttc
ctatcgttcaaagctgctgcacagaaaggaccctccggtgcggagaagaagttccatgtc
ggacgtttgttggacgtcatcgtgaccaaactgtctgacaatgggcggacatgtaatgtc
tcggtcgattcgtatgctcccaaaaccgctccgctcacggaagtgaccagcgtcaagtcc
gttgttcccggtgcacttgtgcagtcattagtcacggcggtacaacctgacggcctgatc
ctacaagtgcttgggttcttcgacggcaccgtcgaccagttccatcttcgatcaggagat
acggaggacaactacaaaatcgggcagaaagtcaaggcccgagttctgtacgacatcagc
ccgtcaaccccacccaggtttgccctgtccttagcagatcacgtagtcaagtacagcgcg
aagtctgccgcttcgggtagtgctgctacggacttgcgggaagcatatcccgtcggaacc
actctggacgctgtcaaagtaaccaggattgagagcgagcgcggcctgaccgtagaggtc
ggctcgggagttgcaggctttgtgcatatttcacaagtctccgatgagcacgtccctacg
ctctcaacaacatccggtgcttggaaagttggaactgtccaccgcgcacgggtcactggc
tacttcccgctcgacggtctcctccagctttctctaaagccatctattttggcgcagaag
ttcttgcaggttgctgacgtccaagtcggagaactcatcaaggggacggtgaagaagctc
acggatactgcgctcttcgtctctatctccggaaacgtcgatggtgtgatttggccgaac
cactacgccgacatcgttttgaagcaccctcaaaagcgcttcaagcccgggggtagcatc
aagtgccgagtcttagttgtcgactccgagcgaaaacgcattgcgcttactgccaagaag
actcttgtcgagtctaccttgccgatcgtgtcgcagctcagcgatgttcgagttggcgtc
gtgacccacgctgttatcttcaagatctcagagaaaagcttgcaggtcgagttctacaac
aacttgaaggcaagcgtgccagcgcgtgaggcgagcgaaaccaccttgtcttctctgtcg
gccgcgttcgccatcggcaagcctgtacaagttcgcctcatcgctgttgacgcggagact
ggtcgcatcacagcaagcattaggcaagccgcccccaacttcaagtctgccatcacggac
atcagcggcgtagacatcggtgacattgtcgaaggcgttgtctctgacatccggaaggac
aaagccgtggtcacccttcagccaacgcaggtcaccgcccttctctccctcaacaatctt
gcgaaccgcagggaagtgtccgtagctcagctgcgatcagcattgaaggtcggggagaag
cttcaggatctcgtcgtcacatcaaggaatccagagaagggcttcgtcttggtggcatca
aaaccgaaggagaaagaggccatactgcagaagaaccacctctctttggacacggtacaa
gccggccagcttgtcggcggccgcgttctgcgtcacaaccgctacggcgctctcatcaag
ctcaccaactctataatgggtgtcctccaccctaccgacgcggtggacgactatgagagc
gggaagcctttccccggagtggactctgtcctgaaggcagtcgtgctttcggtcgacaag
gagaggcggcagttgatgctgtcgacgcgcatgtctcgtcttttcccttctcaggacaag
cccatcgtcgaccgcgagatcacctcgctaagccagctcaaagtcggcgacaaggttcgc
gggttcatcaagagcatcgcggagcacggtttgtttgtcacactcggccgtgatatcgat
gctcgtgtgcagattaaggagctctttgacgactttgtcaaggattggaagagtcggttc
acggtcaaccagcttgtcaacggtcggatcctcagcgtcaatgtagagaagaaacagctc
gaattgtccttccgctctggcgacctaaagcgcgacggccaatcacaactcagcctgtct
gatttgtcggaaggtcagaagattgacggtcgtgtcaagaaggtcgaggactacggtctc
ttcatcgagatcgaaggctcgaagctcagcggcctttgtcacaagtcggagctgtctgac
aacaaggacggtgatgtcactctggcacttcgcagcttccgcgtgggcgacaaggtcaag
gctgtcatcctttccgttgatctggagaagcgccgtgtatcctttggtctcaaaccttcg
tactttgaggagaaggatttcgaacaggagtccgaggctgaagaagaggtcgagccggca
gcagctcttggcgtcgtcgtggaggatgctgagatgtctgacaacgacaacgaggatgag
gatgaggatgaagaggaggacgaggaggttgccgaagccgagggccccgaggacgacgag
tctgcggatgatgaggacgaggatggtggcgacgcggcgatggatgtcgacctcacgctt
gaccttcaacgtccttcaggaagttcagccgccgcttcctcaagcgcaccctcggcagcc
ctcaatcttgcggatggcttccagtggactgtccccaacccagaggacgacgtcgagatg
gagtctgacgacgaaagtgacagcggcaacgaacaagagggcaagaagaagaagaggaag
cgtaaggagatcgagcaggacctgactgcggacatgcacaccaaggtcccagagtctaac
gccgacttcgagcgcctgcttctcgggtccccgaactcgtcctacctctggattcagtac
atgtcattccagctgcagatctcggagatcgacaaggcgcgcgagatcgcgaagcgtggg
ctgaagacaatcaacttccgcgaggagcaggagaagctgaacgtctggatcgcactcctc
aacctcgagaacatttacggcaccgacgagtcgctcgaggccgctttcaaggacgccgcc
cggcacaacgactcgaagactgtccacttgcgtatggccgagatcttcgagcaaagcgac
aagtctgagaaagcagaggagcaattcaagaagacggccaagaagttctcgcagagttcc
aaggtctggaccctctatgccgagcactacctcaagcgcggcatgcttgaggaggcacgg
aagctccttccccgcagcctgcagagtctcgagaaacgcaaacacttgaagaccatttgc
aagttcgcgcagctcgagtacaagttgggtgacccggaacgcggcaagaccatcttcgaa
ggcatcgtggactcgcattccaagcgctgggatatgtggtcgatctacctcgacatggaa
gccgtgcagggcgacatcatgagcttgaggaatcttttcaaccggttgttaactcttaag
atgaccagccacaaagcaaaatcatttttcaagaagtggttagagcttgaacgccgattg
ggagacgaggagggacaggccgcagtcaaggccaaggctatcgaatggacacaacgcgcc
gccggggacgcacagtcgtag
DBGET
integrated database retrieval system