Trametes versicolor: TRAVEDRAFT_140083
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Entry
TRAVEDRAFT_140083 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_140083
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRAVEDRAFT_140083
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
Helicases
TRAVEDRAFT_140083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
Helicase_C
DEAD
AAA_22
HA2_N
ResIII
AAA_19
nSTAND3
AAA_23
ATPase
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
19409153
NCBI-ProteinID:
XP_008033130
JGI:
140083
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MQRTRYNAKARSAHKKKAKHRTDKQETVQDRPDPNATIVVPKTEEEKEQERKLKMREEML
AELDSKANSKKKKRLDKYIEKKLKQEERVDLFEKLSKSQAQASAALHLQSSATLGTGKPS
THLRRLEKEEDLDVRRALDGRAGKGKRRRNDAPPSEAGDREESDEDAYMDIDRSTRYTRE
HDNVQEGMSRSRPVVIVDSGFSTAVQSSGFEDPLPSTSVIGSALRHNSDGTTAAPKISKR
KPKHSKAAFTSWKDTGSNKRNRKPAEDSDASFDSSDSAYDSVEEADEQSGADDASDNPEN
SDAEEAEEPLEEPPQAPSAEESGGTKRKRLGFKDWAMKQLSVAKGYIAPPPDDSATTDPT
LAHVETAPPPKKRKTEHSDGPREMRGPLGEDLQLPHTSLAQHMQESAKKTADGSQSRKRK
VVSVSRPSEVEEARLLLPIVAEEQPIMEAILLNSVVIICGETGSGKTTQVPQFLFEAGFG
SAGSDNPGMIGVTQPRRVAAMSMASRVAHELSLASTRVSYQIRYDATVSPSTSIKFMTDG
VLLRELATDFLLKKYSVIIIDEAHERSMNTDILIGVLSRVVKLREEMWKEGKDDMKPLRL
IIMSATLRVADFAENTALFPSPPPIINVPARQHPVTVHFSRRTSSDYVTEAVKKASKIHA
RLPPGGILIFLTGQNEITGVCKKLETMYGKKAIEEHRKSKISLQTRLSNLAKKLGEDKPP
AHAVAPAHADVEAEDIELGDARRDDEALAFDVDGDIDAEALDSDDEEAENEELGIKAEDT
DVPMHIVPLYALLSSEKQMEVFKEPPPGTRLVVVATNVAETSLTIPGIRYVVDCGRAKER
RYDVANGIQAFQVSWVSKASAAQRAGRAGRTGPGHCYRLYSSALFENYFDPFSQPEILRM
PIEGVVLQMKSMHIDSVANFPFPTPPDRTSLRKAEKVLTHLGALAPAPGGAPLGGPVTEI
GRTMALFPLSPRFSRMLVSGRQHGCLPYVIAIVAALSVGDPFLREEALEGEEDEENEELA
HLTGEAARAKEMRRVRRKAFFQSQQLHSALGNSSSDVLRILSVVGAYEYAGGGHKFCEEH
FVRPKAMEEIHKLRAQISSIVQTNFPDVQTGFEANLRPPNALQLKVLRQLIAAGFIDQIA
VRKDIAAKGAASAGTGAQYTTARGVAYAALGIDEDVFLHPSSVLAGGAPPEYVVFLEVVR
TSRVFVKGLTVANGAWLAALGRALCTYSKPVKNKDGVAMVIPHFGPQGWELPPIREDQK
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcacacgatataatgccaaggcgcggtccgcgcacaagaagaaggcaaaacac
cgcacggacaagcaggagactgtccaggaccgcccggaccccaatgccacaatcgtagtt
cctaagaccgaggaggagaaggagcaggagcggaagctgaagatgcgagaagagatgctc
gcggagctcgactcgaaggcgaatagtaagaaaaagaagagactagacaaatacatcgag
aaaaagctgaagcaagaagagcgggttgacctctttgaaaagctatcgaagagtcaggct
caggcctcggctgcactccacttgcagtcatccgcgactcttggcacggggaagccttcc
actcatctacgccggctggagaaggaggaggaccttgacgtcagacgcgctttggacggt
cgcgcgggcaaggggaaacggcgtcgcaacgatgctccaccgtctgaagccggcgaccgt
gaagagagcgacgaagatgcatacatggatattgaccgctctacaaggtatacgcgcgaa
cacgataacgtccaggagggcatgtcgcgctcaagaccagtggtgattgtggactctggg
ttctccacggcagtgcagtcctccggattcgaagacccattaccttcaacatccgtcatt
ggaagtgcgcttcgccacaattccgatggtactacagcagccccgaagatttcgaagagg
aagccaaaacattccaaggcggcatttacgtcgtggaaagacacgggctccaacaaacgg
aatcggaaaccggcggaggactcggacgcatctttcgacagctcggattcggcctacgat
agcgtcgaagaggccgacgaacagtctggcgcagacgacgcttcagacaaccctgaaaac
tctgacgcggaggaggcagaagagccattggaagaaccaccgcaagcaccttcagcggaa
gagtccggaggcacaaaacgaaaacggcttgggttcaaggattgggccatgaagcaactc
agcgtagccaagggatacatcgccccacctccagatgattctgcgacaacagatcctaca
cttgcgcatgtggagaccgccccaccgccgaagaagcggaaaacggagcactcagacggg
ccaagagagatgcgaggtccgctgggagaggatttgcagctaccacacacttcgctcgca
cagcatatgcaagagtctgccaagaagaccgccgacggttctcagtctaggaagcgcaag
gttgtatccgtgtcgcgcccatctgaggtggaggaagctaggcttctcctcccaatcgtc
gcggaagaacagcctatcatggaggccatactcttgaatagtgttgttatcatctgcggt
gagacgggtagcggtaagacaacacaggtaccccagttcctcttcgaagctggatttggt
tctgccggtagtgacaaccctggcatgatcggtgtcacacagccgcggcgtgttgccgca
atgtccatggcgtctcgcgttgcgcatgaactgtccttagcctccactcgtgtctcgtac
cagatacggtacgacgcgaccgtttcgccgtcgacctcgatcaagttcatgaccgacggt
gtgctcttgcgagagctggccaccgacttcttgctgaagaagtactcggtcatcattatc
gacgaggcgcacgagcggagcatgaataccgatatcctcatcggcgttctgagccgagtc
gtcaagttgcgggaggagatgtggaaggaagggaaggacgacatgaagcctttgcgcttg
attatcatgtctgctaccttacgcgtcgccgactttgcggagaacacggcgctgtttccc
tcgccaccaccgatcatcaacgtccctgctcgccagcatccagtgaccgtccacttcagc
cggcggacgtcgtccgactacgttacagaggcggtcaagaaagccagcaagatccatgcg
cgactgccccctggcggtatactcattttcctcacgggccaaaatgagatcaccggggtg
tgcaagaagctcgagacaatgtacggaaagaaggccatagaggaacaccggaagtcgaag
atatccctgcaaacacgtctcagcaacctggcaaagaagctcggcgaggacaagccacca
gcgcatgccgttgcacccgcacatgccgacgtggaagcggaggacatcgaattgggcgac
gcgcgacgagacgacgaggctctggcgttcgacgtagatggtgacatcgacgcggaggct
cttgactcggacgacgaggaagcggagaacgaggagctgggcatcaaagcggaagacact
gatgttcccatgcatatcgttccactgtatgcgttgctctccagcgagaagcaaatggag
gtcttcaaagagccacctcccggcactcggctagtggttgtggcgacaaacgtcgcagaa
acgtcactcaccattcctggtatccgctatgtggtagactgcggtcgcgcaaaggagcgg
cgatatgatgtcgccaacggtatccaagctttccaagtaagctgggtatccaaagcctcc
gccgcccaacgcgcaggccgtgccggccgcacaggcccggggcactgctaccgcctctac
tcctccgcgctcttcgagaactacttcgacccgttctcgcagcccgagatcctgcgcatg
cccatcgagggcgtcgtgctccagatgaagagcatgcacatcgactccgtcgcgaacttc
cccttccccacgcccccagaccgcacgagcctccgcaaggcggagaaggtgctcacgcac
ctcggcgcgctcgcccccgccccgggtggggccccgctcggcgggcccgtcacggagatc
gggcgcacgatggcgctcttcccgctctcgccgcgcttctcgcgcatgctcgtgagcggg
aggcagcacgggtgcctgccgtacgtgatcgcgatcgtcgccgcgctctcggtgggcgac
ccgttcctgcgcgaggaggcgctggagggcgaggaggacgaggagaacgaggagctggcg
cacctgacgggcgaggcggcgcgcgcgaaggagatgcggagggtccgtcggaaggcgttc
ttccagtcgcagcagctgcactcggcgctcggaaactcgtcgagcgacgtcctgcgcata
ctctccgtcgtaggcgcgtacgagtacgccgggggcggccacaagttctgcgaggagcac
ttcgtccgtccaaaggcgatggaagagatccacaagctgcgcgcacagatcagcagcatc
gtgcagacgaacttccccgacgtccagaccggcttcgaggcgaacctccgcccacccaac
gcgctccagctcaaagtcctccggcagctcatcgccgcgggcttcattgaccagatcgcc
gtgcgcaaagacatcgccgcgaagggcgccgcctcagcgggcacgggggcacagtacacg
accgcgcgtggggtcgcctacgcggcgctgggcatcgacgaggacgtgttcctgcacccg
tcgtccgtgctcgcgggcggggcgccgcccgagtacgtcgtgttcctcgaggtcgtgcgc
acgtcgcgcgtgttcgtcaagggcctcacggtcgcgaacggggcgtggctcgccgcgctc
ggcagggcgctctgcacgtactcgaagccggtgaagaacaaggacggcgtggcgatggtc
atcccgcactttgggccccaggggtgggagctgccgccgatcagggaagaccagaagtga
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