Trametes versicolor: TRAVEDRAFT_140413
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Entry
TRAVEDRAFT_140413 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_140413
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRAVEDRAFT_140413
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
90S particles
Helicases
TRAVEDRAFT_140413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19409171
NCBI-ProteinID:
XP_008033240
JGI:
140413
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MEAFHLLSRGGVKFNKTKFKGDVRLFNGDKAQEPKASTSASASGELPPELNFFKYAEGGA
PKRKAPSADAEADVKGKKRKVQDEDEDTDEEDVPMDDEPPMPRHRVTTKGNNVPEHADTF
EVLRDRYNIPPHLFANLAESGYKRPTGIQSYGVPILMEHRDLAAISPTGTGKTLSYLLPV
MAALGAPAASAKSDAGSGVRAIILAPTRELAHQIHNECLKLAQGRKWRIVLFSKATAATM
KDKTVRDKIDLVISTPLRLVASLKAGHLELGNVRHIVLDEADRMLDTEFLEQVEEVIAAC
TYPDVQKAVFSATLPANAEKVALSMLRDPIRVVVGLKDTPLPLIAQSLTYVADDQSKLPT
LLQYLSQPYNPPVLIFVSSQPRAASLAEELIISGIPNVDCLHAGLSKKEREDAVSRMRRG
ESWVMVSTEVMARGMDFKGVREVINYDFPQTVQSYVHRIGRTGRAGREGKAITYFTDQDG
PWLKTIANVLLQSGSPVPEWILKLPKPSKMKRKQMGKVKRAETVNNARHIGRKDAIKKRD
MIAGSKRRSEKDQQRKVKAAAAPAPSSADNVAGDSS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggaggcattccatctactctctcgaggaggagtaaaattcaacaagacgaagttcaag
ggtgatgtgcggttgttcaatggtgacaaagcgcaggagcccaaagcctccacttctgcg
agcgcatccggcgagctcccgccggagctaaacttcttcaagtacgcggagggaggcgcg
ccaaagcggaaggcaccatccgcggacgctgaagccgacgtcaagggcaagaagcggaag
gtgcaggatgaggacgaggacacggacgaagaggatgtccctatggacgacgaaccgccc
atgccccgacaccgcgttaccacgaagggaaacaacgtacccgagcatgcggacacattc
gaggtcctgcgagaccggtacaacatcccgccccacctgtttgcgaatctagcggagtcc
gggtacaagaggccaacgggtatacagtcatatggagtgcccatacttatggagcataga
gatcttgctgccatatcgcctacgggtaccggaaagacgctctcttacctccttccggtc
atggctgctctcggagctcccgccgcgagtgcgaagtcggacgccggctccggtgttcgt
gctatcatcctcgcgccgacccgtgaactagcgcaccaaatacacaacgaatgtctgaag
ctcgcgcagggcagaaaatggcggattgtactattcagcaaagccactgcggctacgatg
aaggacaagacagttcgagacaaaattgacttggtcattagcacgcctttgcgacttgta
gcgtcgttaaaagcaggtcatctggagctcggcaatgtccgacatatagtgctagacgag
gccgaccgcatgctcgatacagaattcctggagcaagtcgaggaggttatcgccgcatgt
acataccccgacgtacagaaggcggtcttcagcgccacactacctgccaacgcagagaag
gttgctctgtcgatgctccgagatcccattcgtgtcgtcgtcggtctcaaagacacgcca
ttacctctgattgcgcagtccctcacctatgtcgccgacgatcagtccaagttgcctacc
ctcctccagtacctatcacaaccatacaacccaccggtgctcatattcgtctcttcgcaa
cctcgcgcggcgtcgttagcggaagagctcattattagcggtatacctaacgtcgactgc
ttgcacgccgggttgtccaaaaaggagcgagaggacgccgtgtcgcgcatgcgccgcggt
gagagctgggtgatggtcagcaccgaggtcatggctcgcggcatggatttcaagggtgta
cgggaagtcatcaactacgacttcccacagaccgtccagagctatgtccaccgaatcggt
cgcaccggacgcgctgggagagaaggaaaggcgatcacctacttcacagatcaggacggc
ccgtggctcaaaacgatcgcgaacgtgttgcttcaatcgggatcgcctgtgccggagtgg
atcctcaagctgccgaagccgtcgaagatgaagcgaaagcagatgggcaaggtcaagcgc
gcggagacggtcaacaatgcaagacacatcgggcggaaggacgctatcaagaagagggac
atgattgcagggtccaaaaggcggagtgagaaggaccaacaaaggaaggtgaaggctgcc
gcggctcccgccccgtcttccgccgacaacgtcgcgggtgacagctcttag
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