Trametes versicolor: TRAVEDRAFT_142083
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Entry
TRAVEDRAFT_142083 CDS
T04795
Name
(RefSeq) transcription factor Tfb4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_142083
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_142083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_142083
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_142083
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRAVEDRAFT_142083
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRAVEDRAFT_142083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
19409260
NCBI-ProteinID:
XP_008034520
JGI:
142083
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MDTPSHLSVILDLSPTQWALSAQSTNPPGISLETFLSQLLAFLNAHIACKDENTLAVFGA
LPGESVLLYSSTGEVTASDDGPTDSNTYRPFKTLDATVMKSLAERLESFGDAAEEAPIGI
VGCMTKALCYINRITSNTTAAGPNEDGPTASIDPRILVLSVSPDQSSTYIPIMNSIFSAQ
KLKVTIDVCKIFGADNVFLQQAAHLTGGAYVQVDRTDALLQYMMMSFLPPPAIRQLIAVP
TQDRVDFRAACFCHKRIVEIGFVCSVCLSIFCQPVPVCSTCRTKFPIKTLQRLNASRPPA
ASLSSAPGTPARPLAHRNGTATPATPRPG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggacacgccgtctcatctgagtgtcatcctcgacctctctcctactcaatgggctctc
tctgcgcagtcgaccaacccacccgggatctccctcgagacgttcttatcgcagctcctt
gcgttcctgaacgcccatatcgcgtgcaaagacgagaacacgttggcagtgttcggcgcg
ctccctggagagagtgtactcctgtactcgtctactggcgaagtgacagccagtgacgat
gggcctacggactccaacacgtaccgtccattcaagaccctcgacgcgacggtcatgaag
tctctagcggagcgtttggagtcgtttggggatgcagcagaagaagcacccattggtatt
gttggatgcatgacgaaggctctgtgctacatcaacaggatcacgtcgaatactacggcg
gctggaccgaacgaggatggcccgacagcttcgattgacccgcgaatactcgtgctctca
gtctcgcccgaccaatcctcgacttacatccctatcatgaactccatattctccgcccag
aagcttaaagtaacaattgatgtctgcaagatcttcggagcagacaacgtcttcttgcaa
caagcggcgcacctcacaggaggcgcctacgtgcaggtagacaggacagacgcgctcctg
caatacatgatgatgtctttcctaccacctccagccatcaggcagctcatagctgtgcct
acgcaagatcgagtagacttcagggctgcatgcttctgccataagcggatcgttgagatt
gggttcgtctgctctgtatgcctgtctatcttctgccaaccggttcccgtatgctcgact
tgtcgcacgaaattcccgatcaaaaccctgcaacgactgaacgcgtcgcgcccgcctgct
gcgtcgttgtcgtccgccccaggcacgcctgcccggccgctagcacacaggaacggcaca
gcaactcccgcgacaccgcgcccaggctaa
DBGET
integrated database retrieval system
