Trametes versicolor: TRAVEDRAFT_143594
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Entry
TRAVEDRAFT_143594 CDS
T04795
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_143594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_143594
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TRAVEDRAFT_143594
Prokaryotic type
Archaeal type
TFB
TRAVEDRAFT_143594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Guanylin
RB_B
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
19409342
NCBI-ProteinID:
XP_008035530
JGI:
143594
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAYSQPFPLAQPIQKVQQPTFGPDLAVRLICPECRDPNPNIVEEFSSGDLVCGTCGLVLG
DRIVDTRSEWRTFANDEGDDPSRVGAASDPLMEGMEQLDTTISFRDGGSGIARELQRAAS
RSAASRSERNLLQAFRDIAGWCDQFSLPKTISDIAKQLYKRSDEEKLLRGKPLEAVIAAC
IFIACRQAHVPRTFREICNLTHVSKKVLGQCYKALEQAFNLTPGASQDRHLNAPSGTTGA
EDLLVRYCNHLDLPPNVQPICGDIIVKARELGIADGRSPVSIAGGAIYFTCCLLDKPKSV
KEISTVAGVSEGTIKLVYRLYYAEKEKLVKEEWIRDGKAKLERLPVESGSK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcctactctcagccgttccccctcgcacaacccatccagaaggtgcagcagccgaca
ttcggcccggaccttgcagtccgtctcatctgccctgaatgtcgtgacccgaacccgaac
atcgtcgaggagttcagcagcggagatctggtctgtggcacttgtgggctagtgttgggc
gacaggatcgtcgacacaaggagtgagtggcggacgttcgcaaacgacgagggcgatgac
ccttcgcgtgtcggagcggcatctgaccctctcatggagggcatggaacagctggacacg
accatttcgttccgggatggtggttctggcatagcgcgcgagctgcagcgcgcagcatct
cgttcggcggcgtcgcgttcggagcgaaatctcctgcaggcattccgcgacatagccggc
tggtgcgaccagttctccctccccaaaaccatctccgacatcgcgaagcagttgtacaag
cgatcggacgaggagaagctacttcgtggcaagccgctcgaagctgtcatcgcggcgtgt
atcttcattgcctgccgacaagcgcatgtaccgcggacgttccgcgaaatctgcaatctc
actcacgtcagcaagaaggttcttgggcaatgttacaaggccctcgagcaggccttcaac
ctcacaccaggcgcgtctcaggaccgccacctgaacgcccctagcggtacgaccggtgcc
gaggacctcctggttcgttactgtaaccacctcgatctcccgcccaacgtccaacctata
tgcggggacatcatcgtcaaggcccgcgaactgggcatcgcggatggtcgttcgcccgtg
tctatcgccggcggcgcaatctacttcacctgctgcctcctcgacaagccgaagtccgtc
aaggagatcagcacggtcgcgggagtcagcgagggtacgatcaagctggtgtatcgcctc
tactatgcggagaaggagaagttggttaaggaggagtggatcagggacgggaaggcgaag
ttggagagactgccggtggagagcgggtcgaagtaa
DBGET
integrated database retrieval system
