Trametes versicolor: TRAVEDRAFT_145142
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Entry
TRAVEDRAFT_145142 CDS
T04795
Name
(RefSeq) DEAD-domain-containing protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_145142
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRAVEDRAFT_145142
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRAVEDRAFT_145142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
CTT_SPB4
ResIII
Cas3-like_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
19409435
NCBI-ProteinID:
XP_008036566
JGI:
145142
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MSASTAFAGKWASLPVELTPWILDVIHSMGHTQMTPVQASTIPLFMKHKDVVVEAVTGSG
KTLAFVIPILEKLIRREHKLAKNEIGALIISPTRELATQIHSIFSLFLSSQPSRYAASPS
PDEASGSNVQLEPEYPSPLLMISSDSPPAEDVQRFLSTGADIVIGTPGRVEEFLLGKGKN
VVSVKELEVLVLDEADRLLDLGFQAALSRILTHLPKQRRTGLFSATMTDADALSELVRVG
LRNPARIVVKVQSKKLKGKTIAADGTTKVEREVIEERRIPANLQNYYMTCQASEKLVQLT
RILRHEVEHQKSARFIVYFATCACVDYFYRVLTPLMPSNTTLFSLHGHLPPAARTRTLAN
FATSAALPSAPSILLATDVAARGLDLPNVDVVIQFDPPADPKAFSHRCGRTARAGRSGTA
WVLFVGREVDYVEFMSVRKIPMKERRPFRQDGSVRSDDDMDAEDPEVQTAMQTIREKLLT
DRALSDKAVKAFVSFARAYSKHEASYIFRLKDLDMVGLAKSFGLLRLPRMPELKKLSRDG
WQDADVDWNTFAYVDKAQETKRLAEAAAKAAPTPEDIERRKAANAEKQKLNSAWSDKMKQ
REERDKRKEKKDRKKKWLKTQEAAADAAAAEQGSKRGLEDVSGESGGEGDDWAELAREER
LAKRVKKGHLSQSKFDAEFADL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcgacggcctttgcgggcaagtgggctagtcttccagtagaactcacgcca
tggattctagacgttattcactctatgggacacactcaaatgacgcctgtgcaagcgtcc
actatcccactttttatgaagcacaaggacgtcgtcgttgaggccgtcaccgggtccgga
aagacactcgccttcgtcatacctatcctagagaagttgatccggagggagcataagcta
gcgaaaaacgaaatcggtgctctgattatcagcccgaccagagagctggccacgcagata
cactccattttctctctctttctatcatcccagccgtcccgatatgcggcctccccatcc
ccggacgaggcctcaggctcgaatgtccagctcgagccggaatatccctctccgctcttg
atgatatcttccgactctccgcctgcggaggatgttcagcgctttctctccaccggtgcg
gacatcgtcatcggtacaccgggtcgggtggaggagttcctcctcggaaagggcaaaaat
gtcgtgagcgtcaaggagttggaggtcttggttttggacgaggcggatcgtttactcgac
cttgggttccaagcggcactgtcccggatattgacccaccttcctaagcaacgccggacc
ggtctcttcagcgcaactatgacagatgccgacgctctgtcagaactcgtccgcgtcggg
ttgcgcaaccctgcacgcatcgtcgttaaggttcagtcaaagaagctaaaaggcaaaacc
atcgcggccgatggaactactaaggtggaaagagaggtcattgaggaacgtcgaatacct
gccaaccttcagaattattacatgacttgtcaagcctccgagaaactcgtacagttgact
cgaattttacgacacgaagtagaacatcagaaatctgcgcggttcattgtttactttgcg
acttgcgcatgcgtggactacttctaccgagtcctgactcccttgatgccctccaatacc
acgctcttctctctgcacggtcacctcccacctgccgccagaacacggactctcgccaac
ttcgccacctccgctgcactcccatcggccccatccattctccttgcgaccgacgtcgcc
gcgcgtggcctcgaccttcccaacgtcgacgtcgtcatccaattcgatccgccagccgac
ccgaaggcgttttcgcatcgctgcgggcgaacagcccgtgcaggtcgcagcggtacggca
tgggttttgttcgtcggccgtgaggtcgactatgtcgagttcatgtccgtacgcaagatc
cccatgaaggagcggcggccgttcaggcaggacggctcggtacggtcagatgatgatatg
gatgcggaggacccggaggtgcagaccgcgatgcagaccatccgagaaaagctcctcacc
gatcgcgcgctcagtgacaaggctgtgaaggcattcgtgtcatttgctcgagcatattcg
aagcacgaggcttcgtatatctttcggctgaaggacctggacatggttggacttgcgaag
agttttgggttgctgcgattaccgcgcatgcctgaattgaaaaagctttcacgggacggc
tggcaagatgccgacgtggactggaacaccttcgcatatgtcgacaaggcacaggaaacc
aagcgactcgcggaagcggcagctaaggccgcgccgactccggaggacatcgagagacgc
aaagcggcaaacgctgaaaagcagaagctgaactcggcttggagcgacaagatgaaacag
agggaagagcgggacaagcggaaggagaagaaggaccggaagaagaaatggctcaagacg
caggaggctgctgcggatgcggctgctgcagagcaggggagcaagcgcgggctggaagac
gtgagcggggagagtggaggcgagggcgacgactgggcggagctggcgcgggaggagcgg
ctggcgaagcgggtgaagaaggggcacctgagccagagcaagttcgatgctgagtttgcg
gacctgtag
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integrated database retrieval system
