Trametes versicolor: TRAVEDRAFT_156818
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Entry
TRAVEDRAFT_156818 CDS
T04795
Name
(RefSeq) RNA-binding domain-containing protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
tvs03015
mRNA surveillance pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_156818
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_156818
03015 mRNA surveillance pathway
TRAVEDRAFT_156818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_156818
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_156818
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
TRAVEDRAFT_156818
Spliceosome [BR:
tvs03041
]
Common components
Common spliceosomal components
Cap binding complex
TRAVEDRAFT_156818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
19410088
NCBI-ProteinID:
XP_008045260
JGI:
156818
UniProt:
R7S6U4
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MAHIITPLDQPSNYKDSQSRVDRQTQNDLLAKSSTLYVGNLSFYTTEEQIYELFSKCTTP
EDGGGIKRIIMGLDRNTRTPCGFCFVEYYTHAEALACLRYISGTKLDERIIRCDIDLGYR
DGRQFGRGKSGGQVRDEHRQDYDPGRGGWGAQAQRLEAERRREVEERYNDAQDVPGAVAG
GGGEWKSEHNQETMATLKRGRSPEDEGESGRGEPRARVEESEPDADRM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcccatataatcacgccccttgaccagccctcgaactacaaggactcgcagtcgcgg
gtggaccgccagacgcaaaacgacctcctcgccaagtcgagcactctctacgtcggcaat
ctcagtttctacactacggaagagcaaatctacgagctgttctccaagtgcaccactcct
gaggatggaggcggcattaagcgtatcatcatgggtctggaccgcaacaccaggacgccg
tgtgggttctgctttgttgaatactacactcatgcggaggcattagcatgcctccggtac
attagcggtaccaagctagacgagcgcatcattcggtgcgacatcgaccttggctaccga
gacggacgacaatttggcagaggcaaaagtggaggccaggtccgagacgagcacaggcag
gactacgacccgggacgtgggggatggggggctcaagcacagcggctggaggcggagcgc
agacgggaagtcgaggagcgttacaacgacgctcaagacgtccctggcgctgtcgccgga
ggtggaggagaatggaagtctgagcacaaccaggaaacaatggcaacgctcaaacgtggg
cggtcaccggaagacgaaggagaaagcggacggggggagccccgtgcacgagtggaggag
tcggagcccgacgcagaccgcatgtaa
DBGET
integrated database retrieval system
