Trametes versicolor: TRAVEDRAFT_158430
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Entry
TRAVEDRAFT_158430 CDS
T04795
Name
(RefSeq) cyclophilin-like protein
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
tvs
Trametes versicolor
Pathway
tvs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRAVEDRAFT_158430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_158430
03110 Chaperones and folding catalysts [BR:
tvs03110
]
TRAVEDRAFT_158430
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_158430
Enzymes [BR:
tvs01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
TRAVEDRAFT_158430
Spliceosome [BR:
tvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TRAVEDRAFT_158430
Complex C
U4/U6.U5 tri-SnRNP related factors
TRAVEDRAFT_158430
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
TRAVEDRAFT_158430
Chaperones and folding catalysts [BR:
tvs03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
TRAVEDRAFT_158430
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
U-box type E3
TRAVEDRAFT_158430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
Vma22_CCDC115
U-box
Motif
Other DBs
NCBI-GeneID:
19410203
NCBI-ProteinID:
XP_008032828
JGI:
158430
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MGHGNSNKLYVTHAEHSGMFGQHTASSGGHRAKEQATQRHAQTPFDCCDLTFQQFNNPVC
ARNSDGTGNVFELVSIIPWLKQHGNTNPVTQEPLQPSDLITLHYARKSSGEIHDPISFKP
FSDHSHIVAIATTGNVFLAESVKGGRDLVADVKFKKEDVITLQNPHGFPTASVNTKPVQT
AQAAKDKAAEKSDKSKAVAVKPAAAPAVAKAKAAVPWNASPYSTGLPGASLTSTSVDPQT
QSSQLLWDEEELMFDEFANPPKGKGKEKDVGKRRAYVRVITNLGGGALNLELYCEKAPKT
CYNFLQLAKAGKYNDCLFHRLVPGFMIQTGDPTGTGSGGQSCWGTPFRDEYDLRNAAKHD
SRGVIAMANKGPSTNGSQFYIAFRPAAHLDKKHTVFGKLVGGEDVLDALESLPVKPGTER
PAKQVKITEVVIYQDPFEEYKQREQRKRERKAETHETRTKEAEEKAKDDVNWFGVKVGQQ
NANAAVGGGVGKYLNLNANAKRPLEAPTRTMPVSAPPEEGKKKRRIGFGDFEGW
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggggcacgggaactcgaacaagctgtatgtgacccatgccgagcactcgggcatgttt
gggcagcatacggcgtcctcgggtggtcacagagcgaaagagcaagcgacacagcgccat
gcacagaccccatttgactgctgcgacctgactttccagcagttcaacaaccccgtatgc
gcgcgcaactccgatggcaccgggaatgtgttcgagctagtcagtattatcccctggctc
aagcaacacggcaacacgaaccctgtgactcaggaacctctacagccgtccgacctcata
accctccactatgcgcgcaaatcctctggggaaatacacgaccccatctccttcaagccg
ttcagcgaccactcgcacatcgttgcaattgccaccactggaaacgtatttcttgcggag
agcgtgaaaggtggacgggatctcgttgcagacgtgaagttcaagaaggaggatgtgata
actctgcagaacccgcatggttttcccactgcgtctgtaaacactaagccggttcaaacc
gctcaggctgccaaggataaggcggcagagaagagcgacaagagcaaggccgttgcggtg
aagccagctgctgcacccgcggtcgcaaaagcgaaggccgcagtaccctggaatgcgtct
ccgtactctacgggtcttcctggcgcgtctctcacatctacgtctgtcgatcctcaaacg
caaagctctcaactcctttgggatgaggaggagcttatgttcgatgaatttgcgaaccct
cccaaaggcaaagggaaggagaaagacgtcggaaagcgacgagcgtacgtacgtgtcatc
acgaacttgggcggcggtgctctcaacctcgagctgtactgcgagaaggcaccaaaaaca
tgttacaacttcctacaattggcgaaggcggggaagtacaacgactgcctgtttcaccgt
ctcgtacccgggttcatgattcaaactggagacccaacaggtacagggtcgggtggccag
tcatgttggggtacaccattccgggacgagtacgatctgcgaaatgccgcaaagcatgac
agccgaggcgtcatcgcgatggccaataagggcccctccacgaacggctcgcagttctac
attgcgttccgtcccgccgcacatcttgacaagaagcacaccgtcttcgggaaattggtt
ggcggcgaagacgtactggatgcactggagtcgcttcctgttaaaccaggcacagagcgg
cccgctaagcaagtcaagataacggaagttgtcatttatcaggatccattcgaggagtac
aagcaacgcgagcagcggaagcgcgaacgcaaagcggagacacacgagacgcgcactaag
gaggcggaagagaaggcgaaagacgacgtcaactggttcggcgtcaaggtcggccaacag
aatgcgaacgcggctgtaggcggcggcgttgggaagtacctcaacctgaatgccaatgcc
aaacggcctctggaggcgcctacaagaacgatgcctgtcagcgcgccgccagaagagggc
aagaaaaagcgtcgcattgggtttggcgacttcgagggctggtag
DBGET
integrated database retrieval system
