Trametes versicolor: TRAVEDRAFT_158581
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Entry
TRAVEDRAFT_158581 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tvs
Trametes versicolor
Pathway
tvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRAVEDRAFT_158581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_158581
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_158581
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRAVEDRAFT_158581
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TRAVEDRAFT_158581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
19410213
NCBI-ProteinID:
XP_008032874
JGI:
158581
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MATTIPLPVRDIISPQFHQNNFSEEAFVKNELGIKLDKDDQICRLSLTPTGCPLGPQHCP
LRHTTPSVLNFQPPKQLPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECW
WYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPTCPRKHVRRVACQLYLTGFCPL
GPDCPRGHPKPGIPPAKAYDPPEPPSVRDLGPPPPGYGRYADFDRSGGGNFPGPHPPGLG
GSGGPPGPRRNLEDVVCYKCGEKGHYANHCRHHAHKPYKR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaccatccctctccctgtcagggacatcataagtcctcaattccaccaaaac
aacttctctgaggaggcattcgtcaagaacgagctcggaatcaagctagacaaggacgac
cagatatgccggctctcgctcacgccgacagggtgtcctctgggcccacagcactgtccg
ctacgacacaccaccccatcggtgctgaacttccagccaccaaagcaactaccaacgcac
ccccgcgagcgcgagcggctcgcgacggtgtgcaagcactggctgcgcgggctgtgcaag
aagggcgacgcctgtgagttcctgcacgagtacaacctccggcgcatgcccgagtgctgg
tggtacgccaagtacgggtactgctccgcgggcgacgagtgtctgtacgcgcacccgaag
gagcgccgcgtggagtgcccggactacaacagagggttctgcaagctcggtccgacctgc
ccccgaaaacatgtgcgacgggtggcatgtcaactatatctcaccggcttctgtccactc
ggacccgactgcccccgcggccaccccaaaccgggcatcccgcctgccaaggcgtacgac
ccgcccgaaccgccgtcggtgcgcgacctcgggccgccgccgccaggatacggtaggtat
gcggacttcgaccgcagcggcggcggcaacttccccgggccccacccgcccgggctcggg
ggctccggcgggcccccagggccaagacggaacttggaggatgtggtgtgctacaagtgc
ggggagaagggccactacgccaaccactgccgccatcatgcgcacaaaccgtacaagcgg
tga
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integrated database retrieval system