Trametes versicolor: TRAVEDRAFT_158810
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Entry
TRAVEDRAFT_158810 CDS
T04795
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_158810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_158810
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRAVEDRAFT_158810
Spliceosome [BR:
tvs03041
]
Complex C
Other components
Step II factors
TRAVEDRAFT_158810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
S1
AAA_22
AAA_19
AAA_30
nSTAND3
T2SSE
AAA_16
SLFN-g3_helicase
Ploopntkinase3
Retinal
Motif
Other DBs
NCBI-GeneID:
19410229
NCBI-ProteinID:
XP_008032930
JGI:
158810
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MADSDIYNLEFLSLVAKITQEINNHTGLTDKTLAEFVISLHDQSKSLPDFKDKLREVGAN
FPDSFIENVDRLILTLHPKHKKKINVVGKDSGSGDGAAIDETDKKKRLFPGLALQDQGWQ
PSVTKDGKDVIMKEVDDLMSQFEGGAKKARPRPTEDDRSPKRQRRSRSRSPPRRRSPSPV
RGRGHDDRRDDRRGRGDRGRQVDERPVLFKIYDGRVNGLKEFGAFVQLEGIAGRVEGMVH
VSNIQQGARANAASDLLTRGQAVKVKVMSLAGTRIGLSMKDVDQATGRDLTPHLRIKSEA
EMVAEEQQRAAHGANAVPLNSRESKVEVVRSAKRLTSPERWEIKQLISSGAIDASEYPDL
DEDFANPLARAEVEEELDVEVKEEEPPFLAGQTKKTLELSPVKIVKAPDGSLNRAAVAGA
SLAKERRELRQQEANEEADSEARDFSAPWLDPMAKEGDRVFAQDLRGNIRGQKAGEQPKW
KEATFNKATTFGEITHMSIQEQRKSLPIYKLRDPLLQAIREHPVLIVVGDTGSGKTTQMT
QYLAEAGFADKGRIGCTQPRRVAAMSVAKRVAEEVGCRLGQEVGYTIRFEDCTSPETRIK
YMTDGMLQRECLIDPDVSQYSVVMLDEAHERTIATDVLFGLLKKAIKRRPDLKLIVTSAT
LDAEKFSKYFFGCPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLSEPPGDVLLF
LTGQEEIDTACEILYERMKALGPKVPELIILPIYSALPSEVQSRVFEPTPPGARKVVVAT
NVAETSLTIPGIYYVIDPGFSKQNAYDPRLGMDSLVVMPISQAQARQRAGRAGRTGPGKC
YRLYTEAAFRNEMLPNSIPDIQRTNLSHTILMLKAMGINDLLSFDFMDPPPAPTMITALE
SLYALSALDDEGLLTRLGRKMADFPMEPPLAKMLIASVELGCSEEILSIVAMLSVQSVFY
RPKEKQGQADSKKAKFHQPEGDHLTLLTVYNGWKASNFSNPWCYENFIQARSMRRAQDVR
KQLLGIMDRYKHDIISAGKDYNRVRRAICSGYFRNAAKKDPQEGYKTLVEGTPVYIHPSS
ALFNRNPEWCIYHELILTTREYCHNVTAIEPKWLVEVAPQFFKVADANKISKRKRQEKIE
PLFNKYEKPDEWRLSKVKRSARSSQTFG
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcggacatctacaacctcgagtttctttccctagtcgccaaaattactcag
gagataaacaaccacactgggctcaccgacaagactctcgccgagttcgtcatctccctc
catgaccaatccaaatccctcccagacttcaaggacaagttgcgcgaagtcggcgccaac
ttccccgactctttcatcgagaatgtcgaccgtctcatcctcacgctccatccgaagcac
aagaagaaaatcaatgtcgtagggaaggacagcggctctggggacggtgccgccattgat
gagacggacaagaagaagcgtctgttccccggcctcgctctccaggatcagggttggcag
cctagcgtcaccaaggatgggaaggatgttatcatgaaggaggtggacgacttgatgtcg
cagttcgagggcggggcgaagaaagcgcgtcctagaccaacagaagacgaccgctctccg
aagcgtcaaaggcgctctcgttcccgctctcctccgcggcgtcgaagtccaagccccgtc
cgagggcgtggccatgatgacagacgagatgacaggcgaggtaggggcgatcgtggtagg
caggttgacgagcggccagtgctcttcaagatctatgacggtcgcgtgaacggtctgaag
gagttcggggcattcgtccagctcgagggtattgccggtcgagtagaaggcatggtgcat
gtttccaacattcagcagggcgcgcgtgcgaacgcagcttctgacctattgacacgcggg
caagctgtgaaggtcaaagtgatgagtctcgccggaacccgaattggactctccatgaag
gacgtagaccaagcaaccgggcgtgacttgacacctcatctacgcatcaagtcagaggcg
gagatggtcgctgaggagcaacaacgcgcggcgcatggtgcaaatgccgttcccctcaat
tcccgtgaaagcaaagtcgaagtggtcaggtcagctaagcggttgacctctccagagcgg
tgggaaatcaagcagctcatctcatccggtgccattgatgcttcagagtaccccgatctc
gacgaggacttcgccaaccccctggcgcgtgctgaagtagaggaggaactagacgtcgag
gtcaaggaagaggaacccccgttcctggcaggccagacgaagaagacgctggagctgagt
cctgtaaagatcgtcaaggcaccggacgggtcgctcaaccgtgctgcggtcgcaggagca
tccttagccaaggagcgtcgtgagcttcggcagcaggaggcgaacgaggaggcagattcg
gaggcgcgcgacttcagtgccccttggctcgaccccatggcgaaggagggcgaccgcgtg
tttgctcaggatctccggggcaacattcgcggtcagaaggccggcgagcagccgaagtgg
aaggaggccaccttcaacaaggccacaacgttcggagagatcacccacatgagcatccag
gagcagcgcaagagcttacctatctacaagctgcgcgacccgcttctccaggctattcgc
gagcatccggtcctcatcgttgttggtgacactggctccgggaagacgactcagatgact
caatacttggctgaggcaggctttgctgacaagggacggattggatgcacacagcccaga
cgtgtcgcagccatgtccgtggccaagcgtgtagcggaggaagtaggctgtcggttgggt
caggaagtcgggtacaccatccgtttcgaggattgcaccagccccgaaactcgcatcaag
tacatgacggacggtatgctccagcgagaatgtcttatcgaccccgacgtgagccaatac
tctgtcgtcatgctggacgaggcgcacgaacgtacaatagccaccgatgttctgtttggt
ttgctcaagaaggctatcaaacgccgaccagacctgaagctgattgtcacctccgctacc
cttgacgctgagaagttctcgaagtacttcttcgggtgtcccatcttcaccatccctggt
aggacgtaccctgtcgaagtcctctacacgaaggagcccgagacggactatctcgatgcg
tcgcttatcactgtcatgcagatccatctctctgaaccacctggtgatgtccttctcttc
ctcacgggtcaggaggagatcgacacggcgtgcgagatcctctacgagcgtatgaaggcg
cttggccccaaggtccccgaactcatcatcctgcccatctactccgcccttccgtccgag
gtacagtcgcgcgtgtttgagcccacccctcccggtgcccgcaaggtcgtcgttgcaacc
aacgtcgcggaaaccagtctcaccattcctggtatctactatgtcatcgaccccggcttc
tccaaacagaatgcctacgatccccgtcttggtatggactcactggtcgtcatgcctatc
tcacaggcgcaggcgcggcagcgtgccggtcgcgctggtcgtaccggtcctgggaagtgc
tatcgcctttatactgaggcggcgttcaggaacgagatgctgccgaactccatccccgat
atccagcggacgaacttgtcgcacacgatcctgatgctcaaggcgatgggcatcaacgac
ctcctcagcttcgatttcatggacccgccaccggcaccgaccatgatcacggcactcgag
tcactatacgcgctctccgccctggatgacgaaggtctgttgacgcgcctcggccgcaag
atggccgacttccctatggagccccccctcgcgaagatgctcatcgcctcggtcgaactc
ggatgctcggaggagattctgtccatcgtcgcgatgttgtccgtgcagagcgtcttctac
cgcccgaaggagaaacagggccaggcggactccaagaaggcgaagttccaccagccggag
ggtgaccacctgacgctactcactgtgtacaacgggtggaaggcgagcaacttctccaac
ccctggtgctacgagaacttcatccaggcacggagcatgcggcgtgcacaggatgtccgt
aaacagctactcggtatcatggataggtataaacacgacatcatctccgctggcaaggac
tacaaccgcgtgcgccgcgccatttgctcagggtacttccgtaatgccgcgaaaaaggac
ccgcaggagggctacaagacgctcgtcgagggcacgcccgtctacatccacccgtcgtca
gcgctcttcaaccgcaatccggagtggtgcatctaccatgaactgatcctcaccacgcgc
gagtattgccacaacgtaaccgcgatcgagcccaagtggctcgtggaggttgcgccgcag
ttcttcaaggtcgcggacgcgaacaagatcagtaagcgcaagcggcaggagaagatcgag
ccgcttttcaacaagtacgagaagccagacgagtggcggctgtcgaaggtcaagcgcagt
gcacgttcgagtcaaacgtttggttga
DBGET
integrated database retrieval system
