KEGG   Trametes versicolor: TRAVEDRAFT_158986
Entry
TRAVEDRAFT_158986 CDS       T04795                                 
Name
(RefSeq) TFIID and SAGA subunit
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tvs  Trametes versicolor
Pathway
tvs03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TRAVEDRAFT_158986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvs03021]
    TRAVEDRAFT_158986
   03036 Chromosome and associated proteins [BR:tvs03036]
    TRAVEDRAFT_158986
Transcription machinery [BR:tvs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     TRAVEDRAFT_158986
   Coactivators
    SAGA/TFTC/STAGA complex
     TRAVEDRAFT_158986
Chromosome and associated proteins [BR:tvs03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     TRAVEDRAFT_158986
    STAGA complex
     TRAVEDRAFT_158986
    TFTC complex
     TRAVEDRAFT_158986
    SAGA complex
     TRAVEDRAFT_158986
    SLIK complex
     TRAVEDRAFT_158986
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz TFIID_NTD2 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd WDR55 ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_SCAP NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_EIPR1 WD_LRWD1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_HPS5 eIF2A Beta-prop_WDR75_2nd LisH Cytochrom_D1 Beta-prop_WDR19_1st ELYS-bb
Other DBs
NCBI-GeneID: 19410246
NCBI-ProteinID: XP_008032976
JGI: 158986
LinkDB
Position
Unknown
AA seq 798 aa
MSAATPAASTPDGVSPSATGAASAEPHKDLATNAEQLILEYLRARGHTAAEKAFLEEIER
NASSVDKGKQPETAPSPTITQEELVKQLAIFAQAPSDPEQNALKDGAKVLQELSSTGAPQ
NIQNLVSSIGAVGVEEIVTLDPTDKHEGFRELEAWVDGSLDMYRPEFRPILFPIFSHFYL
DLVHQGFRTAAQGFYSSFSSSLSGVHHSTLNHLSTITLPYHVQTDEVAQRFRTEKYTVRM
SRSGFGLLVGWLTEGVGGEPTGSGEGFAGEKGRRGRAAVMRVVNNHLRFEVTSAPTTSIS
ARAWEESTGFLSAVVPQTNGINSDASSYNTSKGELKLGPAPMQEDLRVETERTLQEQALV
DHDPGARYDLHIVRQAPPPGLLSPTLAELPPHPPMFKTIDVKREVEKVRDTRKRIRLDPS
VLNGANMNTAQGATARARALPSICAYTFHDVGEGIPCCEFSPDTSLLAAGFSESYVRIWS
LKGEKLKGYRSDFQSSSVRDPSSLNKIREKGGSTTRKLIGHSGPVYSVAFDPIGGSASPP
RYLLSASADATTRLWSLDTMTNVVAYRGHQNPVWDVKWSPMGIYFATASRDRTARLWSTD
RTSALRIYAGHLSDVNAVGFHPNSLYLGTASSDGTARLWDVQRGSCVRVFYRHDDIVSTL
SFSPDGRYLATAGEDMAIRLWDLGSGKCVKKMTGHTASVYSLAFSAESSLLVSGGADWTV
RCWDVKSSGGPRTKARENGTLTNGATDDHPPEKEEVESNETTDLLATFPTKRTPIINAQF
TPRNLCLVAGPYLSPETR
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgtccgccgctacgccggccgcgtctactccggacggagtctcaccctctgctaccggc
gccgcttcagcagaaccccataaagatctcgctacgaatgctgagcagctgattctcgaa
tacttgcgcgctcgaggacacaccgccgccgaaaaggcctttctcgaggagatcgagcgc
aacgcctcctccgtggacaagggcaaacagcctgagaccgcgccttcccctaccataact
caggaagagctcgtcaagcagctcgcgatatttgcacaggcgccttcggacccagagcag
aacgcgctgaaggatggcgcgaaagtcctgcaggaactgtcttccacgggcgcgccgcag
aatatacagaacctcgtgtccagtataggtgcagttggcgttgaggagatagttaccctg
gacccaaccgataaacatgaagggttccgagagcttgaggcatgggtcgacggttctctc
gacatgtaccgcccagagttcaggcctatattgttccctatattctcgcatttctacctg
gaccttgtgcaccaggggttccgcacagctgcgcaaggcttttactcttcattttcgtca
tcgctgtctggggtccatcactcgacactcaatcacctatccacgattacactgccatac
catgtccagacggacgaagtcgctcagcggtttagaacagagaagtataccgtgcgaatg
agccgctcagggttcggtctgctagtcggctggttgacggagggagtcggcggggagcct
acaggatctggagaaggctttgcgggtgagaagggtcgtcgaggccgggcggctgtcatg
cgggtggtgaacaaccatctccgcttcgaagtgacatccgccccgaccacatctatatca
gcccgcgcctgggaggagtcaacagggttcctctcggcggttgtgccgcagacaaatggg
atcaacagtgacgcaagttcctacaacacgtccaaaggcgagctgaagcttgggcccgct
ccaatgcaagaagatctacgcgtggagacagaacggactctccaggaacaggcactggtc
gaccacgaccccggtgctcggtatgacctccatatcgtccgacaagcccctccaccagga
ctactatcgcccacattagcggaactgcctccacatccgcccatgttcaagacgatagac
gtcaagcgagaagtcgagaaagtccgtgacacgcggaaacggatacgtctggacccttcc
gtgctgaatggcgcaaacatgaacaccgcacaaggcgccactgctcgggcacgcgccctg
ccgagcatatgtgcatatacctttcatgatgttggcgagggaattccatgttgcgaattc
tcacctgatacctctcttcttgccgccggattttccgagagttacgtccgaatctggagc
ctcaaaggcgagaagctaaagggctaccgtagcgacttccagtcgagctcggtacgagat
ccgtcttcgttgaataagatccgagaaaagggcggttcgacgaccaggaagctgatcggg
cacagcgggcccgtctactccgtcgcctttgatcccatcggtggttctgcaagcccacca
cgctacctcctttccgcttctgcagatgcaacaacgcgcctgtggtcgcttgataccatg
acgaacgtcgtcgcctaccgggggcatcagaacccggtctgggacgtgaagtggagtccc
atgggcatctacttcgcgaccgcaagtcgagacaggaccgcacgcctatggtccacagac
cgaacgtcggcgttgcgaatatacgccggccatctcagcgacgtgaacgccgtaggattc
catccgaactcgctgtatcttggcacagcttcgagcgacggcaccgcgagactatgggac
gtacagcgcggctcgtgtgttcgggtgttctaccggcacgacgacatcgtctcgacgctt
agcttcagcccggacggccgctatctcgcaacagccggcgaggacatggcgatccgtcta
tgggacctcgggtcgggcaagtgcgtcaagaagatgacaggtcacaccgcgtctgtatac
tcgctcgcgttcagcgcggagtcgagtctgctagtgagcggcggtgcggactggaccgtg
cgctgttgggacgtcaagtcctccggtggccctcgcacgaaggcccgcgaaaacggcacg
ttgacgaacggagcgacggacgaccacccaccggagaaggaggaggtcgagagcaacgag
acgactgatctgctggcgacgttcccgacgaagcggacgccgatcatcaacgctcagttc
acgccgaggaacttgtgcttagtagctggtccgtacttgtctccagagacgcgatga

DBGET integrated database retrieval system