KEGG   Trametes versicolor: TRAVEDRAFT_162564
Entry
TRAVEDRAFT_162564 CDS       T04795                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
tvs  Trametes versicolor
Pathway
tvs04111  Cell cycle - yeast
tvs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TRAVEDRAFT_162564
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    TRAVEDRAFT_162564
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvs04121]
    TRAVEDRAFT_162564
Ubiquitin system [BR:tvs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     TRAVEDRAFT_162564
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR41 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_EML_2 WDR55 DSE1_N Beta-prop_TEP1_C F-box-like Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_Aladin TRM82_WD Beta-prop_DCAF12 F-box Vts1 Beta-prop_DCAF4 Beta-prop_EIPR1 F-box_COS111 SWIM Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 19410525
NCBI-ProteinID: XP_008035391
JGI: 162564
LinkDB
Position
Unknown
AA seq 653 aa
MPIIPPPTPAPSPPPQQSSFPSPSLATFTHISAFAGLTPAARRQHLYALIQECTPSELLF
LSTTIAPLLKRDFLRALPPEVSLHILSFIDDPRTLARAALVSRYWNELLKDEFLWKTMAI
RHGFSRDAEAVESYRREQLLDGAPPVASDPLPSGSGAEARRSPLFSPRGLQPPRPQSVDF
PYRKFFIHEYIRTSNWLGKGKLLRIHRALLHPPPPDPNMPGQLAPPATAQQQGQDQGPLA
NPAIPTSMAIDAQWVVVGLANSRIHIFSARTGVLSRTLIGHDSGVWAVALISEGGQPVGR
DPCMHPCEGDPLVASHPQDEALPLALRTAVGLDKSTNISKVRLRPRSVPDPFAEGGKAER
PRFGKPSYPGGASDGWGQPSALVVSGGCDKELRVWDVKTGYCIYTLRGHTSTIRCLKVVH
GRPLAVSGSRDRTVRVWDVQRGRLLRVLEGHTQSVRCLDVCGNRIVSGSYDCTCRIWDVD
TGACLHVLRGHFHQIYTVAFDGERIASGGLDTTVRVWDASNGACLALLQGHTALVCQLQL
TPTMLATGGSDGRVITFSLTGSAFLAVQRLAAHDSSVSGLQLDERFLVTSGNDGRVRLYE
FERGAQGDAQCRFVRDMCEPSESVWKVAYTRETCAVLSKKAGKMVVEIWSFKP
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgcccatcataccgccgcccacccccgccccatcgccacccccgcaacaatcttcattc
ccgagcccgagcctcgcgacgtttacacacatctccgccttcgccggcctaacccccgcc
gcacgacggcagcacctctacgccctcatccaggaatgcacaccatcagagctcttgttt
ctttctacgaccatcgcgccactcctcaagcgcgacttcctccgagctctcccgcccgag
gtatcccttcacattctgagctttatcgatgacccccgcacgcttgctcgtgctgcactt
gtcagcaggtactggaatgagcttttgaaggacgaattcctgtggaagacgatggcaata
cgtcacggtttctcgcgagacgcagaggcggtggaatcgtaccgccgggagcagttgctc
gatggcgctcctccagtagcaagcgaccccctgccgagcggctcgggagcggaggcacgc
aggagcccgctattctcaccaaggggactccagccgccccgcccacagagcgtcgacttc
ccataccgcaagttcttcatccacgaatatatccgaacgtcgaactggctcgggaagggc
aagctcctgcgcatacaccgcgccctgctgcacccgccgcccccggaccccaacatgccc
gggcaactcgcgcccccagcgacggcgcagcagcaagggcaggaccagggcccactcgcg
aatcccgcgatcccgacgtcgatggcgatcgacgcgcagtgggtcgtcgtcgggctcgcg
aacagccgtatccacatcttcagtgcgcgcacgggcgtgctcagccgcacgctcatcggg
cacgactccggcgtgtgggcggtcgcgctcatttcggagggtgggcagccggtgggccgc
gatccgtgcatgcatccgtgcgagggcgacccgctcgtggcgagccacccgcaggacgag
gcgctcccgctggcgctgcgcacggctgttgggctggacaagtccactaatattagcaag
gtgcgcttgcggcccaggagcgtccccgatcccttcgcggagggcggcaaggcggagcgt
ccgcgcttcggaaagccgagctaccccggaggtgcttcggatggctggggtcagcccagc
gcgctcgtagtgagcggtggatgcgacaaggagctccgtgtttgggacgtgaagacgggg
tactgcatctacacccttcgcggccacacgtctacgatccgctgcctgaaggtggtgcat
ggacgaccactcgccgtatcaggctcgcgcgatcggaccgtacgcgtgtgggacgtgcag
cgtgggcgccttctacgcgtgctagagggccacacgcagagcgtgcgctgtctcgacgtg
tgcggcaaccggatcgttagcgggagttatgactgcacctgccgcatatgggacgtggac
accggcgcatgtctgcacgtcctgcgcgggcactttcaccagatctacacggtcgcgttc
gacggcgagcgcatcgcgagcgggggactggacaccaccgtccgggtgtgggacgcttcg
aacggcgcgtgtctcgcgctactccaagggcacaccgcactcgtctgccagctccagctc
acgccgacgatgctcgcgacgggcggctcggacgggcgcgtgatcacgttctcgctcacg
gggagcgcgttcctcgccgtgcagcggctcgcggcgcacgacagctccgtgtcgggcctg
cagctcgacgagcgcttccttgtcacgagcgggaacgacgggcgcgtgcggctgtacgag
ttcgagcgcggcgcgcagggcgacgcgcagtgccgcttcgtgcgcgacatgtgcgagccg
agcgagagcgtgtggaaggtcgcgtacacgcgcgagacgtgcgcggtgctcagcaagaag
gcgggcaagatggtcgtcgagatctggagcttcaagccctga

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