Trametes versicolor: TRAVEDRAFT_162564
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Entry
TRAVEDRAFT_162564 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K03361
F-box and WD-40 domain protein CDC4
Organism
tvs
Trametes versicolor
Pathway
tvs04111
Cell cycle - yeast
tvs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRAVEDRAFT_162564
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TRAVEDRAFT_162564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_162564
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
TRAVEDRAFT_162564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_EML_2
WDR55
DSE1_N
Beta-prop_TEP1_C
F-box-like
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ASA1
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Aladin
TRM82_WD
Beta-prop_DCAF12
F-box
Vts1
Beta-prop_DCAF4
Beta-prop_EIPR1
F-box_COS111
SWIM
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
19410525
NCBI-ProteinID:
XP_008035391
JGI:
162564
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MPIIPPPTPAPSPPPQQSSFPSPSLATFTHISAFAGLTPAARRQHLYALIQECTPSELLF
LSTTIAPLLKRDFLRALPPEVSLHILSFIDDPRTLARAALVSRYWNELLKDEFLWKTMAI
RHGFSRDAEAVESYRREQLLDGAPPVASDPLPSGSGAEARRSPLFSPRGLQPPRPQSVDF
PYRKFFIHEYIRTSNWLGKGKLLRIHRALLHPPPPDPNMPGQLAPPATAQQQGQDQGPLA
NPAIPTSMAIDAQWVVVGLANSRIHIFSARTGVLSRTLIGHDSGVWAVALISEGGQPVGR
DPCMHPCEGDPLVASHPQDEALPLALRTAVGLDKSTNISKVRLRPRSVPDPFAEGGKAER
PRFGKPSYPGGASDGWGQPSALVVSGGCDKELRVWDVKTGYCIYTLRGHTSTIRCLKVVH
GRPLAVSGSRDRTVRVWDVQRGRLLRVLEGHTQSVRCLDVCGNRIVSGSYDCTCRIWDVD
TGACLHVLRGHFHQIYTVAFDGERIASGGLDTTVRVWDASNGACLALLQGHTALVCQLQL
TPTMLATGGSDGRVITFSLTGSAFLAVQRLAAHDSSVSGLQLDERFLVTSGNDGRVRLYE
FERGAQGDAQCRFVRDMCEPSESVWKVAYTRETCAVLSKKAGKMVVEIWSFKP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcataccgccgcccacccccgccccatcgccacccccgcaacaatcttcattc
ccgagcccgagcctcgcgacgtttacacacatctccgccttcgccggcctaacccccgcc
gcacgacggcagcacctctacgccctcatccaggaatgcacaccatcagagctcttgttt
ctttctacgaccatcgcgccactcctcaagcgcgacttcctccgagctctcccgcccgag
gtatcccttcacattctgagctttatcgatgacccccgcacgcttgctcgtgctgcactt
gtcagcaggtactggaatgagcttttgaaggacgaattcctgtggaagacgatggcaata
cgtcacggtttctcgcgagacgcagaggcggtggaatcgtaccgccgggagcagttgctc
gatggcgctcctccagtagcaagcgaccccctgccgagcggctcgggagcggaggcacgc
aggagcccgctattctcaccaaggggactccagccgccccgcccacagagcgtcgacttc
ccataccgcaagttcttcatccacgaatatatccgaacgtcgaactggctcgggaagggc
aagctcctgcgcatacaccgcgccctgctgcacccgccgcccccggaccccaacatgccc
gggcaactcgcgcccccagcgacggcgcagcagcaagggcaggaccagggcccactcgcg
aatcccgcgatcccgacgtcgatggcgatcgacgcgcagtgggtcgtcgtcgggctcgcg
aacagccgtatccacatcttcagtgcgcgcacgggcgtgctcagccgcacgctcatcggg
cacgactccggcgtgtgggcggtcgcgctcatttcggagggtgggcagccggtgggccgc
gatccgtgcatgcatccgtgcgagggcgacccgctcgtggcgagccacccgcaggacgag
gcgctcccgctggcgctgcgcacggctgttgggctggacaagtccactaatattagcaag
gtgcgcttgcggcccaggagcgtccccgatcccttcgcggagggcggcaaggcggagcgt
ccgcgcttcggaaagccgagctaccccggaggtgcttcggatggctggggtcagcccagc
gcgctcgtagtgagcggtggatgcgacaaggagctccgtgtttgggacgtgaagacgggg
tactgcatctacacccttcgcggccacacgtctacgatccgctgcctgaaggtggtgcat
ggacgaccactcgccgtatcaggctcgcgcgatcggaccgtacgcgtgtgggacgtgcag
cgtgggcgccttctacgcgtgctagagggccacacgcagagcgtgcgctgtctcgacgtg
tgcggcaaccggatcgttagcgggagttatgactgcacctgccgcatatgggacgtggac
accggcgcatgtctgcacgtcctgcgcgggcactttcaccagatctacacggtcgcgttc
gacggcgagcgcatcgcgagcgggggactggacaccaccgtccgggtgtgggacgcttcg
aacggcgcgtgtctcgcgctactccaagggcacaccgcactcgtctgccagctccagctc
acgccgacgatgctcgcgacgggcggctcggacgggcgcgtgatcacgttctcgctcacg
gggagcgcgttcctcgccgtgcagcggctcgcggcgcacgacagctccgtgtcgggcctg
cagctcgacgagcgcttccttgtcacgagcgggaacgacgggcgcgtgcggctgtacgag
ttcgagcgcggcgcgcagggcgacgcgcagtgccgcttcgtgcgcgacatgtgcgagccg
agcgagagcgtgtggaaggtcgcgtacacgcgcgagacgtgcgcggtgctcagcaagaag
gcgggcaagatggtcgtcgagatctggagcttcaagccctga
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integrated database retrieval system