Trametes versicolor: TRAVEDRAFT_165758
Help
Entry
TRAVEDRAFT_165758 CDS
T04795
Name
(RefSeq) WD40 repeat-like protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
tvs
Trametes versicolor
Pathway
tvs04111
Cell cycle - yeast
tvs04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TRAVEDRAFT_165758
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TRAVEDRAFT_165758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvs04121
]
TRAVEDRAFT_165758
Ubiquitin system [BR:
tvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
TRAVEDRAFT_165758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
F-box-like
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
F-box
Beta-prop_SPT8
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
F-box_4
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
19410784
NCBI-ProteinID:
XP_008036942
JGI:
165758
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSSQPSARKLCVRHQRMADEGTNLKLQQALDALPVAEREAVSAIWSAFSSSPHPRRALIL
QGLLTMCCFSQLSLLTEQLAQLIRIDPFAVLPREVSLKVLGYLDATSLCRAAQVSRQWKS
LADDDILWRGICEQHIGQKCLKCGWGLPILEKKRRPLPPAASASTSSSSASVSSSPSPSP
SLPGPSSTSRLKRAHDDPEPGPSGASTHSAKRLRLEERNRAASPPSEAIVNTVPPSAYPS
NPLIVPLSETPATDLKTRPWKDVYCERLTIERNWRRGRCTVRTLKGHTDGVMCLQFAETL
AHPSFPVLITGSYDRTARVWNLETGAEVHTLAGHTRAIRALQFDAAKLITGSMDHTMRVW
NWRTGQCVKTLEGHTAGVVCLNFDSNVLASGSVDTTVKVWNFRTGECFTLRGHCDWVNAV
QLWDANATPTGCGSGPSAPSRLAVESGSSAPQIDAGKMLFSASDDGTIRLWDLSLRTCVR
QFKGHVGQVQSLKLLLVDDERRESNDPATAAADAELLLDSSLSPRFSSPYPTASPLLKRS
HTTPAASALEWTTPASPVKRQKPVLISGSLDNTIKVWDIETGKVQRTLFGHIEGVWAVAS
DKLRLVSGSHDRTIKVWSREEGNCTATLVGHRGAVTCLALGEDKIVSGSDDGDIRVWSFS
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccagccctctgcgcgcaaactttgcgtacggcaccagcgcatggcggacgag
ggcaccaacctcaagctgcagcaggcactcgatgcgctccccgtcgccgagcgcgaggcc
gtcagcgcgatctggtccgcgttctcctcgtcgccccatccgcggcgcgcgctcatcctc
caggggctcctcactatgtgctgcttctcccagctttcgctcctcaccgagcagctcgcg
cagctcatccgcatcgaccccttcgccgtcctcccgcgcgaggtctccctcaaggtgctc
ggctacctcgacgccacctctctttgccgcgccgcgcaggtctcacgccagtggaagagc
ctcgcggacgacgatatcctctggcgcgggatttgcgagcagcatatcggtcagaagtgc
ctcaagtgcggatggggtttgcccatcctcgagaagaagcgccgccccctcccacccgcc
gcatctgcttcgacgtcctcttcatccgcgtccgtgtcttcgtcgccttccccatcgcca
agcctgcctgggccgagctctacgtctaggctgaagcgagcacatgatgacccggagcca
ggaccgtccggggcgtcaacgcattcagcaaagaggttgaggctagaggaacgcaaccgg
gcagcgtccccgccgtcagaagccatcgttaacaccgtgcccccctccgcctacccttcc
aaccccctcatcgtgcccctttccgagacccccgccaccgacttgaaaacccgcccgtgg
aaggacgtctactgcgagcgcctcacgatcgagcgaaattggcggcgcgggcgatgcacc
gtgcgcacgctcaaggggcacaccgacggcgtaatgtgcctgcagttcgcggagacgctc
gcgcacccgtccttcccggtgctcatcacgggctcgtacgaccgcaccgcgcgcgtctgg
aacctcgagacgggcgcggaggtgcatacgctcgcgggacacactcgcgcgatccgcgcg
ctgcaatttgacgcggccaaactcatcaccggcagcatggaccacacgatgcgcgtgtgg
aactggcgcaccgggcagtgcgtgaagacgctcgagggccacaccgcgggcgtcgtctgt
ctcaacttcgactcgaatgtgctcgcgagcgggtccgtcgacactacggtaaaggtctgg
aacttccgcaccggcgagtgctttacgctccgcgggcactgcgactgggtcaacgccgtg
cagctctgggacgcgaacgcgaccccgaccgggtgcggcagcggccctagtgctcccagc
cggctcgctgtcgagagcgggtcatcagcaccacaaatcgacgcgggcaagatgctcttc
tccgcttcggacgacggcacgattcgcctctgggacctctccctgcgcacatgtgtgcgc
cagttcaagggtcacgtcgggcaggtgcagagcctcaagcttttgctcgtcgacgacgag
cggcgcgagtccaacgaccccgccaccgccgccgcagacgccgagctcctcctcgactcc
tcgctctccccgcgcttctcttccccgtacccaaccgcctccccactgctgaagcgcagc
cacactacgcccgccgcgtctgcactggagtggacgacgcccgcctcgccggtgaagcgc
cagaagccggtgctgatctcgggcagcctggacaacacgatcaaggtgtgggacatcgag
acgggcaaggtgcagcgcacgctctttgggcacatcgagggcgtgtgggccgtcgcgagt
gacaagctgcgcctcgtgagcggcagccatgaccgcaccatcaaggtgtggtcgcgcgag
gaaggcaactgtaccgcgacgctcgtcggacaccggggcgcagtgacatgtctcgcgctt
ggcgaggacaagatcgtgtccgggagcgacgacggggacatccgtgtctggagtttcagc
gggtag
DBGET
integrated database retrieval system