Trametes versicolor: TRAVEDRAFT_165790
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Entry
TRAVEDRAFT_165790 CDS
T04795
Name
(RefSeq) tRNA-intron endonuclease catalytic domain-like protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvs03016
]
TRAVEDRAFT_165790
Enzymes [BR:
tvs01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
TRAVEDRAFT_165790
Transfer RNA biogenesis [BR:
tvs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
TRAVEDRAFT_165790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
Rrn6_K-rich
Motif
Other DBs
NCBI-GeneID:
19410786
NCBI-ProteinID:
XP_008036955
JGI:
165790
LinkDB
All DBs
Position
Unknown
AA seq
317 aa
AA seq
DB search
MASDSDSDRKIQLRVSNDKAYVWDVEDIAALRAKHHVCGVLTGTLPHLSQQNVFLGVPLV
LLPEEVVLLMEKQLAVLIDDPNAHQPPSAEALEHWNMEREASAIQQIAISEAERASDKAA
KLSSSEEAIRKRKEREAKRAAAALAKAIAEGISAEEFAQASSDRLVEERPATPSKPAPPT
FNVTIPASSSELKWYAPRGHAHPTLASARTAGVWSYPTTPYERAKCRVFQDLWEKGNFMG
GGIKFGGDFLVYPGDPLRYHSHFVATVIESPKAPLMPMEVVAHGRLGTATKKSHLFCEWD
EQSQEVTYFSVEWAGFG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgactccgactccgaccgcaaaatccagctgcgagtctccaacgacaaggca
tatgtctgggacgtagaggacatcgcagctctacgcgcgaaacaccatgtttgcggcgtt
ttgaccggaacgctgccccatctgtctcagcagaatgtcttcctcggagtacctctcgta
ctgctaccggaagaggttgtgctactcatggaaaagcaactcgcggtgctaatcgacgac
ccaaatgctcaccaaccgccttccgcggaggcattggaacattggaatatggagcgagaa
gcatctgcaatccagcagatcgcaatatcggaagccgagagggcatcagacaaggccgcg
aaattgtcgagctccgaggaagccatccggaagcgcaaggagcgcgaggcaaaaagagct
gctgccgcgctcgcgaaagccatagcggaagggatctctgctgaggagtttgcccaggcg
tcttcggaccgactcgtcgaggagcgcccagcgacccctagcaagcccgcaccgccgacg
tttaacgtgacaattccagcaagctcgtctgagctgaagtggtatgctccccgtggacac
gcgcacccgaccctcgcttcggctcgtaccgcaggggtgtggtcgtacccaactaccccc
tacgaacgggccaagtgtcgcgtgttccaagacctctgggagaagggaaacttcatgggt
ggaggcatcaaatttggaggcgacttcctggtataccctggcgatcccttacggtaccac
tcgcacttcgtcgcgaccgtcatcgagtctcccaaggcgcctcttatgccgatggaagtt
gtggcgcatggacgattgggtacggcgacgaagaagtctcatttgttctgcgagtgggac
gagcagtcgcaggaagtcacatacttttctgtcgagtgggccgggtttggttga
DBGET
integrated database retrieval system
