Trametes versicolor: TRAVEDRAFT_168399
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Entry
TRAVEDRAFT_168399 CDS
T04795
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
tvs
Trametes versicolor
Pathway
tvs04142
Lysosome
tvs04144
Endocytosis
tvs05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TRAVEDRAFT_168399
04142 Lysosome
TRAVEDRAFT_168399
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
TRAVEDRAFT_168399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvs04131
]
TRAVEDRAFT_168399
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvs04147
]
TRAVEDRAFT_168399
Membrane trafficking [BR:
tvs04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
TRAVEDRAFT_168399
Exosome [BR:
tvs04147
]
Exosomal proteins
Proteins found in most exosomes
TRAVEDRAFT_168399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_Vps41
TPR_COPA_B
TPR_PEP5_VPS11
TPR_14
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
19410972
NCBI-ProteinID:
XP_008038867
JGI:
168399
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MDISKPIAFCEHLQLSAIGIQPASISFQTLTLESDHFICVREKVNEANQVVIVDLADANN
VLRRPITADSAIMHPHQKILALKAGRTLQVFNIETKQKVKSHVNNEDVVFWKWISDTTLG
LVTETAVFHWTISDATSPPQKIFDRHPTLVGAQIINYRASADEKWLVLIGISGNTTNPAA
FKVKGAVQLYSRERGVSQPIEGHAASFAELKLDGHQKPTKLFTFSVRTATGAKLHIVEID
HQAPDAPFTKKAVDVYFPPEATNDFPVAMQVSKKHGIIYLVTKYGFIHLYDLESGACLYM
NRISGETIFVTAEHEASNGIIGVNKKGQVLSVSVDEQTIVPYILTTLNNTELAFKLASRA
NLPGADDLYIKQYQQLFQSGQYGEAAKIAANSPRGILRTAQVIESFKQAPSPPGGLSPIL
QYFGILLEKGELNQHESLELARPVLQQGRKQLLEKWLKENKLTCSEELGDIVRPYDMTLA
LSVYLRANVHNKVIACFAETGQIDKILLYAKKTGYTPDFVGLLQHIMRTNPEKGAEFATQ
LVKDEGGPLVDVERVVDIFMSQNMIQPATSFLLEALKDNKPEQAHLQTRLLEMNLLHAPQ
VADAILVNQILTHFDRPRIANLCEKAGLLQRALELYEDLADIKRVIVHTTAFPVEWLVDY
FSRLTTEQSFACMQEMLRVNIRQNLQIAVQIATKYSDILGPVKLIEMFESFKSYEGLYYY
LGSVVNLSQDPEVHFKYIQAATRTGQIREVERICRESNYYNPEKVKNFLKEAKLTDQLPL
IIVCDRFDFVHDLVLYLYQRGLTNFIEVYVTRVNSVRTPQVIGGLLDVDCDETTIKSLLA
SVPGNFPIDELVQEVESRNRLKLILPWLEARVQQGSQDPAVYNALAKIYIDSNSNPEQFL
KENNLYEPLVVGKFCEARDPYLAYIAYAKGFCDEELIHITNENAMFKQQARYLARRRQPD
LWAQVLRPDNIHRRQLIDQIVATALPESTDPDDVSITVKAFLTADLPLELIEILEKIILE
PSPFSDNRSLQNLMMLTAIRADKGKVVGYIDKLQNYDIEEIPKIAIEHGLYEEAFLIFKK
YEQHAQAINVLVEHVVSLDRGVEYANKVDKPEVWSRLAKAQLDGLRIKDAIDSYIKAEDP
SNYAEVIEIASRAGKSDDLVRYLQMARKSLREPKIDTELAYAYAKTDRLHDMEDFLAMTN
VADVLEVGEKCFEDELYQAAKILFTSISNWARLATTLIYLGENQGAVESARKAGNTQVWK
QVHAACVEKGEFRLAQICGLNIVVHAEELSALVQMYERRGFFDEVLSLLEAGLSLERAHM
GIFTELAILYSKYKPEKLMEHLKLFVGRINIPKVIKAAERAHLWPELVFLYIKYDEFDNA
ALAMIERSADAWEHNQFKDVVVRVANVEIYYKALTFYLQEQPTLLTDLLSVMIPRIDHSR
VVRMFQQIDHIPLIRSYLIAVQHLNIEAVNEAYNNLLIEEEDYKTLRDSIDSFDNFNNMK
LARELEKHELLEFRRLAAHLYKKNKKWEESIALSKQDKLYKDAIVTAASSAASEIAEDIL
SYFVDIGNKECFAATLYCCFDLLRADVVEELSWQHGLNDFYMPYKIQRTRTTIERLAQLE
KEVKERSKKDTEKEQQEAEAPIIQPGLGGRLMLTQGNGFPSQAPPMMPNGTGFGIPPSMT
GFGGF
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggatatttctaagcccatcgcgttctgtgaacatctccagctctctgccatcggtata
cagccggcgtccatatccttccagacccttaccctcgagtcggaccacttcatttgcgtg
cgcgagaaggtcaacgaggcgaaccaggttgtcatcgtagaccttgcagacgccaacaat
gttctgcggagaccaatcacggccgactcggccattatgcacccgcaccagaagattctc
gcgttgaaagctggccgcacattgcaggtgttcaacatcgagacgaagcagaaggtcaag
tcacacgtcaacaacgaggatgtcgtcttctggaagtggatttcggacactacccttggt
cttgtcacggaaaccgcggtcttccactggacaatctcggacgcgacctcccccccgcag
aagatctttgaccgtcatcccacactcgtcggcgcgcagatcatcaactaccgggcgagt
gctgatgaaaagtggctcgtcctcattggtatctcgggcaacacgacgaaccccgcggcg
ttcaaggtcaagggtgccgtgcaactgtacagcagggagcggggcgtcagccagccgatc
gagggtcacgcagcgtcattcgccgaactcaagcttgatggacaccagaagccgacaaaa
ctgttcactttctcggttcgcactgccactggcgcaaagctccacattgtcgagatcgac
caccaagcacctgacgcgccgttcactaagaaggcggtcgatgtctactttcctccagag
gcgacgaacgatttcccggtcgcaatgcaggtctcgaagaagcacggcatcatctacctc
gtcaccaagtacggcttcatccacctctacgacctcgagtctggcgcatgtctctacatg
aaccgtatctctggcgagaccatcttcgtgacggccgagcacgaggcttccaatggtatc
atcggtgtcaacaagaagggccaggtgttgagcgtcagcgttgacgagcagactatcgtc
ccctatatcctaacgacgctgaacaacacggaactcgcgttcaagctcgcgagccgtgcg
aatctccctggtgccgacgacctatacatcaagcagtaccagcagcttttccagagtggt
cagtatggagaggctgccaagattgctgcgaactcgcccaggggtatcctccggactgcg
caggttatcgagtcgttcaagcaggcgccctcaccaccgggcggcctgtccccgatcctc
cagtatttcggtatattgttggagaagggtgagctcaaccaacacgagtcgctggagctg
gcgcgtcctgtcctgcagcagggccgcaagcagcttctcgagaagtggttgaaggagaac
aagctcacatgcagcgaagagctcggtgacatcgtccggccatacgacatgacgcttgcg
ctgagcgtgtacctccgcgctaacgtgcacaacaaggtgatcgcatgcttcgctgagacg
ggccagatcgacaagatcctcttgtacgccaagaagaccggctacacgcccgacttcgtt
ggcctgctacagcacatcatgcgcaccaaccctgagaagggcgccgagttcgctactcaa
ctggtgaaggacgaaggtggtcctctggtcgacgtcgagcgggtggtcgatatcttcatg
tcgcaaaacatgatccagccggcaacgtcgttcttgctggaggcgctgaaggacaacaag
ccggagcaggctcatctgcagactcgtctgctcgagatgaacctgctccacgcccctcaa
gttgcggatgccatcctcgtcaaccagattctgacgcacttcgaccgccctcgcattgcc
aacctgtgcgagaaggccggcctcctccagagggcgcttgagctgtacgaggatctcgcg
gatatcaagcgtgttatcgtacacacgaccgcgttcccggtcgagtggcttgtggactac
ttcagccgccttacgaccgagcaatcgtttgcatgcatgcaggagatgcttcgggtcaac
atccgccagaacctgcagatcgctgtgcagatcgccacgaagtactccgacattctcggt
cccgtgaagcttattgagatgttcgagtcgttcaagagctacgagggtctgtactactac
ctcggctcggtcgtcaacctcagccaggatcctgaggtccacttcaagtacatccaggct
gcgacccgcactggacagatccgggaggtcgagcgcatttgtcgcgagagcaactactac
aaccccgagaaggtcaagaacttcctcaaggaggccaagctcaccgaccagctcccgctc
atcatcgtctgcgaccgcttcgactttgtgcacgacctcgtgctgtacctctaccagcgt
ggtctcaccaacttcatcgaggtgtacgtcacgcgcgtcaactccgtgcgcacgccccag
gtcatcggtggcctgctcgatgtcgactgcgacgagacgacgatcaagtcgctcttggcc
tccgtgcctgggaacttcccgatcgacgagcttgtgcaggaggtcgagagcaggaaccgc
ctcaagctcatcctcccttggctcgaggcgcgtgtccagcagggcagccaggacccggcc
gtgtacaacgcgctggcgaagatctacatcgactcgaacagcaacccggagcagttcctc
aaggagaacaacctctacgagcctctcgttgtcggcaagttctgcgaggcccgcgacccg
tacctcgcgtacattgcgtatgcgaagggcttctgcgacgaggagctcatccacatcacg
aacgagaatgcgatgttcaagcagcaggctcggtacctcgcccgccgccgtcaacccgac
ctctgggcccaggtcttgcgcccggacaacatccaccgtcgtcagctcattgaccagatc
gtggccaccgccctccccgagagcactgaccccgatgatgtctccatcaccgtcaaggcg
ttcttgacggccgatctcccgctcgagctcatcgagatcctcgagaagatcatcctcgag
ccctcgccgttcagcgacaaccgcagtctgcagaacctcatgatgctcacggccatccgc
gcggacaagggcaaggtcgttggctacattgacaagctgcagaactacgacatcgaggag
atcccaaagatcgccatcgagcacggcctgtacgaggaggcgttcctcatcttcaagaag
tacgagcagcatgcacaggcgatcaacgtgctcgtcgagcacgtcgtctctctcgaccgt
ggtgtggagtacgcgaacaaggtcgacaagcccgaagtatggagccggcttgctaaggcc
cagctcgacggtcttcgcatcaaggacgccatcgactcgtatatcaaggctgaggacccg
tccaactacgctgaggtcatcgagatcgcgagccgcgcgggcaaatcggacgacctcgtt
cgctacctccagatggcgcgcaagtctctccgcgagcctaagatcgacactgagctagcg
tacgcgtacgcaaagaccgaccgtctccacgacatggaggacttcctcgcgatgaccaac
gtcgcggacgtgctcgaggtcggcgagaagtgcttcgaggacgagctgtaccaggctgca
aagattctgttcacgagcatctctaactgggcgcgtctcgcgactactctcatctacctt
ggtgagaaccagggtgcggtcgagagcgcgcggaaggctggcaacactcaggtctggaag
caggttcatgctgcgtgtgtggagaagggcgagttccgcttggctcaaatctgtggtctc
aacatcgttgtgcacgcggaagagctctccgcactggtgcaaatgtacgagcgtcgcggg
ttcttcgacgaggttctatcgcttctcgaggctggtttgagcttggagcgggcacacatg
ggtatcttcacggagcttgccatcctctacagcaagtacaagccggagaagctcatggag
cacctcaagctcttcgttggtcgcatcaacatccccaaggtgatcaaggctgccgaacgt
gcccacctctggcccgagctggtgttcttgtacatcaagtacgacgaattcgacaacgct
gcacttgctatgatcgagcggtccgcggatgcttgggaacacaaccagttcaaggacgtc
gtcgtccgggttgccaacgtcgagatctactacaaggctctcaccttctacctccaggag
cagcctacattgctcacggacctcctgtcggttatgattccccgtattgaccactcgcgg
gtggttcgcatgttccagcagatcgaccacatccctctcattcgttcatatctcatcgcg
gtgcagcacctcaacatcgaggcggtcaacgaggcgtacaacaacttgcttatcgaggag
gaggactacaagacgcttcgggactcaatcgacagcttcgacaacttcaacaacatgaag
ctcgcgcgcgagctggagaagcacgagctgctcgagtttaggagattggccgcacatctg
tacaagaaaaacaagaagtgggaggagtccatcgcgctgtccaagcaggacaaactgtac
aaggacgcgatcgtcaccgcggcatcgtccgctgcgtcggagatcgcggaggacatcctg
tcctacttcgtcgacatcggcaacaaggagtgcttcgcggcgacgctctactgctgcttc
gacctgctccgtgcggacgtcgtcgaggagctgtcatggcagcacggcctcaacgacttc
tacatgccctacaaaatccagcggacacggacgacgatcgagaggctcgctcagctggag
aaggaggtcaaggagcggtcaaagaaggacaccgagaaggagcagcaggaggccgaggcg
cccatcatccagcccggcctcggcggcaggttaatgctcacgcaaggcaacggcttccca
tcgcaggcccctccgatgatgcctaacggcaccggcttcggcattcctccttcgatgacg
ggctttgggggcttctga
DBGET
integrated database retrieval system
