Trametes versicolor: TRAVEDRAFT_169134
Help
Entry
TRAVEDRAFT_169134 CDS
T04795
Name
(RefSeq) DNA helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tvs
Trametes versicolor
Pathway
tvs03022
Basal transcription factors
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRAVEDRAFT_169134
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_169134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_169134
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_169134
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRAVEDRAFT_169134
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRAVEDRAFT_169134
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRAVEDRAFT_169134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
19411045
NCBI-ProteinID:
XP_008039596
JGI:
169134
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MASKRAAEGPADSFNPAKRSRKGKDDEDYAETDNLDAVEIQSPPDTPSTTRGAKINVSAL
TRKLAEARHQRVQEEAHQESSLTAHRRQQDALVSHIFHDLDFSWLHLKPDHASRPLWISP
EDGHIILEAFSPIAEQAQDFLVAISEPVSRPAFIHEYKLTHYSLYAAVSVGLQTEDIIEV
LNRLSKVPVPDSIADYIRERTLSYGKVKLVLKHNRYFVESSHPETLQILLKDKIIREARV
HTQVVDTSIRAATFTTSKAPVKGNLVIPGIKEGEKKKDDLLTNGKNGSKTDAELFTSVVG
VDNDEVDEDDDNVHAFEIDDAKIDDVKKRCNELEYPMLEEYDFRNDTVNANLDIDLKPST
VIRSYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLCTSSVSVMQW
RQQFMQWSNVTDKQIAVFTAESKEKFAGESGIVVSTYSMVANTHNRSHESKKMMEFLTSR
EWGFILLDEVHVVPAAMFRRVVTTIKAHAKLGLTATLVREDDKIADLNYMIGPKLYEANW
MDLAAKGHIANVQCAEVWCPMTPEFYREYLREQSRKRMLLYCMNPKKFQACQFLIKYHED
RGDKIIVFSDNVFALEAYAKKLGKLYIHGGTGQTERMRILQWFQHSPEVNTIFLSKVGDT
SIDLPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMFYST
KRQQFLIDQGYAFKVITHLDGLDDLPSLVYKSRDEQIELLSSVLLANESEADLGTDVRAG
EGDLAGTITSKDFGMPTKMPAVQRTTGSLTALSGAQHMSYVEQNKSANKKLAREVAPRHK
LFAKRDKDKATARKEARKP
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaagagggcagcagaaggtcctgcggattctttcaaccctgcgaagaggtcc
aggaagggcaaagatgatgaggactatgctgagacggataacttggacgctgtcgagatt
cagtcgcccccagacacgccttccaccactcgcggcgccaagattaacgtcagtgcgctc
acacgcaagctggcggaagcgcgacaccagagagtgcaggaggaggcccaccaagagtcg
agcttgaccgcgcacaggcgacagcaggacgctctcgtctcacatatattccatgacctg
gacttctcgtggctacatctcaagccagaccacgcctcgcgtccgctttggatcagccca
gaggatggccacattatcctcgaggccttctcccccatcgcggaacaggcgcaggacttc
ctggtagccatttctgagcctgtcagcagacccgccttcatccacgaatacaagctcact
cactactcgctatacgccgcggtatctgttggactgcaaacagaggacatcatagaagtg
ctgaaccgcttgtcaaaggtaccggtacccgacagcatagccgactacatccgcgagcgt
actctttcatacggcaaggtcaaactcgtcctcaagcacaacagatacttcgtcgagtcc
agtcatcccgaaaccctacaaatcctgctgaaggacaagattattcgagaagctcgcgta
cacacacaagtcgtcgacaccagtatacgggcagcgacgtttactacttcgaaggcccca
gtaaagggcaaccttgtgattcctggcatcaaggaaggcgagaagaagaaggatgatttg
ttgacaaatggcaagaacgggtcgaagaccgacgctgagctgttcacttcggtggttggt
gtcgacaacgacgaagtcgatgaggacgacgacaacgttcatgccttcgagattgacgat
gcgaagatcgatgatgtcaagaaacgatgtaatgagcttgaatatcccatgctggaagaa
tacgacttccgcaacgacactgttaatgcaaatctggacatcgacctgaaaccgtctacc
gtcattcgttcatatcaagagacgagcctgagcaaaatgttcggtaacgggcgtgcccgg
tcggggattatcgtgctaccctgtggtgctggtaaaacgcttgtgggcatcactgcagcc
tgcacgatcaagaagtcgtgtctcgttctctgtacctcttcggtatccgtgatgcagtgg
cggcagcagttcatgcaatggtcgaacgttaccgacaagcaaattgccgtcttcactgcg
gagtcgaaggaaaagttcgctggcgagagcggtatcgtggtgtcgacttattccatggtc
gcgaacacgcacaaccgttcgcatgagtcaaagaagatgatggagtttctgacgtcccgc
gagtggggtttcattctgctcgacgaggtccatgtcgtgcccgctgctatgttccgccgg
gtcgttacgacaatcaaagcccacgcgaaactcgggcttaccgcgacacttgtccgggag
gacgacaaaattgcggacttgaactacatgatcgggccgaagctgtatgaggcgaactgg
atggaccttgccgcaaagggccatatcgcaaatgtgcagtgtgccgaggtgtggtgcccc
atgacccctgagttctatcgggagtacctccgagagcagtcgcgcaagcgcatgctgctc
tactgcatgaaccccaagaagttccaggcgtgccagttcctcatcaagtatcacgaggac
cgcggcgacaagatcattgtcttctctgacaacgtgttcgcgcttgaggcttacgccaag
aaacttgggaagctatatatccacggtggcacgggtcagacagaacgcatgcgcatcctg
cagtggttccaacacagcccggaggtcaacactatcttcctttcgaaggtcggcgatacg
tcgatcgacctgccagaggcgacgtgtctcatacagatttcctcccacttcggttcgcgg
cggcaagaagcacaacgactcgggcgtatcttgcgtgcaaagcggcgtaacgacgagggc
ttcaacgcgttcttctactcgctcgtctccaaggacacacaggagatgttctacagcacg
aagcggcagcagttcctgatcgaccagggctacgcgttcaaggtgatcacgcacctcgac
gggctcgacgacctgccctcgctcgtgtacaagtcgcgcgacgagcagatcgagctgctc
tcgtccgtgctgctcgcgaacgagagcgaggcggacctcggcacggacgtgcgcgcgggg
gagggcgacctcgccggcacgatcacgtccaaggactttgggatgccgacgaagatgccc
gcggtgcagcgcacgaccggctcgctcaccgcgctcagcggcgcgcagcacatgtcgtac
gtcgagcagaacaagtctgcgaacaagaagctcgcgcgcgaggtcgccccgcgccacaag
ctgttcgcgaagcgtgacaaggacaaggcgacagcgcggaaggaggccaggaagccgtaa
DBGET
integrated database retrieval system
