Trametes versicolor: TRAVEDRAFT_171157
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Entry
TRAVEDRAFT_171157 CDS
T04795
Name
(RefSeq) DNA mismatch repair protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
tvs
Trametes versicolor
Pathway
tvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRAVEDRAFT_171157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_171157
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRAVEDRAFT_171157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
19411197
NCBI-ProteinID:
XP_008041255
JGI:
171157
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MALMYGKEKDAEYEIDNSSHPGFCSFFTKLPAKSPDSGTVRLFYRNEYYSVHGPDALYVA
THVFRTNSVIKYLGGRAGLPSVTLSESLAKTFLRDALTSKQLKVEIWVPEAGQGKKATKF
VLDKEASPGNLSAVEDLLFVNTDIVSAPIVMAIKMASAPVTAGSNAAKTRTVGVAYADSS
TRELGVADFVDNDIFSNTETLIIQLSVKEAIIPTGTASGTTERDFDLKKLKEVLDRCGVV
ITERKPSDFMTKSIADDLLRLLNPSSTPSSSSSDATATIPQLQLPSAPAALSALVSYLSL
LSDTSNHGAWSIRTHDLSQYMRLDASALRALNLTEAPGNIGSNKNTTLFGLLNKCKTAQG
SRLLGSWLKQPLVNRHEILKRQSLVEAFFDDANSRRILQDDYLKLMPDMHRICKRFQKSV
ASLEDVVRVYQAVLKLEGLISTIEGMDTSSEDQKALLEEAYLTKFREYDTALSKYSEMVQ
QTLDLDELEHHNFVIKPDYDDRLRTLADKLGEVRDGLDAEHRKSGKALGLELDKKLHLEN
SPQYGYCFRVTKADGKALTDDKRRWQELGTLKSGIFFTTSTLKELSTEYTELTQQYSRTQ
SGLVKEVVNIASTYTPILEAWNNVIAYLDVVISLAHVAVNAPEAYVKPEILEKGSGNLVL
KEARHPCLEVQDDISFIPNDVEMIKGDSEFQIITGPNMGGKSTYIRQVGVIALMAQTGSF
VPCSEARVPIFDSILCRVGAGDSQLKGISTFMAEMLETATILRSASKDSLIIIDELGRGT
STYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQEIKHVKNLHVVAHVSDADAEGR
DRDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARRKADELEDFNTDKGEPELPAEV
VEEGTQIVEELLRAWAATQGGHDGEDVVMGDEEASEEAQLEELRRCVEKFRPRIESNPWV
QSVLATL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttatgtacggaaaggagaaggatgcagaatacgagattgacaactcctcgcac
cctggcttctgctccttctttacaaaactcccagccaaaagccccgactctgggaccgtc
cgtctattctacaggaacgagtactactcagtacacggccccgacgcactctacgtagcc
acccatgtcttccgcaccaactcagtcatcaagtacctcggcggtcgtgcaggcctgcct
agtgtcaccctgagcgagagtcttgcgaagactttcttgagagacgctttaacgagcaag
cagctcaaagtggagatatgggttcccgaagccggccagggaaagaaagctaccaagttc
gtgcttgataaggaggcttctcccggtaacttgtcggcggtcgaggacctgctcttcgtg
aatacagatattgtttctgcgcccatagtcatggctatcaagatggctagcgccccagtg
accgcggggagcaatgcagctaaaaccagaacggtcggggttgcatacgcggacagcagt
acgcgcgagctcggggtcgccgacttcgtagacaacgatatattctccaacactgagact
ctcatcattcaactctcggtgaaagaagccatcataccgactgggacagcttctgggacg
accgagcgcgacttcgatctgaagaaactcaaggaggtcctggaccgctgtggtgtagtg
ataacggagcgaaagccaagtgacttcatgacgaaaagcatcgccgacgatctccttcgg
ttgttaaatccgagttccaccccatcctcttctagctccgatgccactgcgacaatcccc
caactacagctcccctcagccccagcagcactgtctgctctagtctcttacctctccctc
ctttccgatacctccaatcacggtgcatggagcatacgcacacacgacctatcacagtac
atgagactagatgccagcgctctgcgcgcactcaacttgaccgaagccccagggaacatc
gggtccaacaagaatacgactttgttcggcttgttgaacaagtgcaagacggcacaaggg
tccagacttctcggaagttggctcaagcaaccccttgtgaaccgccatgagatcctcaag
cgacagagtcttgtcgaagcattctttgatgacgccaactcccgtcgaatcctccaagat
gactacctcaagctcatgccagacatgcaccgcatttgcaagcgattccagaaatccgtc
gcgtcgttagaggacgtcgtccgtgtataccaagccgtgctgaaactcgagggcctcatc
agcacgatcgagggaatggacacaagctccgaggaccagaaggcgctcctcgaggaagcc
tacctcactaagttccgcgaatacgacaccgcactgagcaagtactcggaaatggtgcag
cagacactcgacctcgatgagcttgaacaccacaacttcgtgatcaagcccgactatgac
gatcgtctacgtacgctcgcggacaagctcggtgaggtgcgcgacgggctggacgcggaa
catcgcaagtccgggaaggcgctcgggctcgagctcgacaagaagctgcacctcgagaac
tcgccgcagtacgggtattgcttccgggtcacgaaagcggacgggaaggcgttgacggac
gacaagcggaggtggcaggagctcggaacgctaaaaagcggcatcttcttcacaacatcg
actctgaaggagctctcgacggagtatactgagctcacgcagcagtactcacgcacacag
agcgggctcgtgaaggaggtggtgaacattgcatcgacctacacgcctatattggaggct
tggaacaacgtcatcgcatatctcgacgtcgttatcagccttgcgcacgttgctgtcaat
gctcccgaggcgtatgtcaagcctgagatcctagagaaggggtctggtaatctcgtccta
aaggaagcccgccacccgtgcctcgaggtgcaggacgatatcagcttcattccaaacgat
gttgagatgatcaagggtgatagcgagttccaaatcatcactggtcccaacatgggcgga
aagagcacatacattcgccaggtcggcgtcatcgcgctcatggcgcaaacaggcagcttt
gtcccctgctcggaggcgcgcgtgccgatattcgactccattttgtgccgtgttggtgca
ggggacagccagctgaagggtatctcgacgtttatggcggagatgctggagactgcgacc
attctgcgatccgcgtccaaggactcgttgatcatcatcgacgaactcggaagagggacg
tcgacatacgacggattcggcctggcatgggccatctctgagcacatcgcgtcccaaata
cacgcattctgcatgttcgcgacccacttccacgagttgaccgcactcgaccaagagatc
aaacatgttaagaaccttcacgttgtcgcgcacgtttccgacgcggacgcggagggccgc
gatcgcgatatcacgctgctgtacaaggtcgaaccgggcgtatgcgaccaaagtttcggt
atccatgtcgcggagctcgcgaacttccccgaaagcgtcgtgaagctcgcacgacggaaa
gccgacgagctcgaggacttcaacacagacaagggcgagcccgagctccctgcagaagtc
gtcgaggagggcacgcagatcgttgaggagctgctgcgcgcatgggcggcgacacagggc
ggacacgatggcgaagacgtcgtgatgggcgacgaggaggcgtccgaggaggcgcagctc
gaggagctgcggcgctgcgtggagaagttccgcccgaggattgagagcaatccgtgggtg
cagagcgtgctggcgacgctctag
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