Trametes versicolor: TRAVEDRAFT_172114
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Entry
TRAVEDRAFT_172114 CDS
T04795
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_172114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_172114
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRAVEDRAFT_172114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
19411286
NCBI-ProteinID:
XP_008041635
JGI:
172114
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSNHTPLRGSSLTPITAIRSTLLSRSAPSIPPASQTYEPLVKGVLRHRLYKIFLHSAIFC
WALATIWMTWSASGRSGMGVKASLLLPIRPSTLAFAVATFAAGALPVVVLRKTHLVAAPT
PATSPSKILSGALQKRSTAHALFTYLASSLSLLVLHIMITGAYDVNASPNSRLTIFVKSR
KHPYYLNGHLIYVLLSQVVVATACLLRCVLLDRFAVRWANTLVPQGDAKLKSFGLARVVT
VGLTALVYTILVTVAQLSVFALARSVVLPLLFQVPVLNRFLRPFMAHFLRGPWTVTLLTR
HWSLVSRAFYLALTTVGIWEFAESAFDGVVAEPIAVAPQTADQGLTLISGITSTDGYLKH
FAYAELREFSADDSSAASARRTALFTDQKYNPSMWSTLAREALLVLGRDYQLLLSRGKPP
SPAAAAPAPASKPSVPLPAPATPLIRTKVYKPPKTSPLHAAFDTFASDGPLAAAVSETAE
AGASHIPELFRSVMPNTPQATAEAAVQSVKKAEENVAALVNETKSKWRASISACVPGVVK
QSAGQVKGWWTRERVHRVAETSLPNRHMDALAAEALCRLTCASLTEDSYGIVQRDIPKII
EALLSFLTALEEYQAELTAAHTPAPPSSEKASPREAAEREMLAMEAARAGEVLGVVSDAI
RDGIVQIVRTFGDKLSAFKFPPRIARKLQGFVDYN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccacactcctctgcgggggtcttctttgactcccataacggctatacgatct
acgctcctctcacgaagtgccccctccatcccacctgcctctcaaacttacgaaccgctt
gtgaagggtgtcttgcgccaccgactgtacaaaatatttcttcattctgcgattttctgc
tgggctctcgcgacaatatggatgacttggagtgctagtggaaggtctgggatgggtgtg
aaggcttctctcctcctgcccatcaggccgtcaacactagcttttgcggtggccaccttc
gcggccggtgcgctgcctgtggtggtattgaggaagactcatttggtcgctgcgccaaca
ccagccacctcaccgtcaaagattttgagcggtgcgctccaaaagcgtagtacagcccac
gcactcttcacctacctcgcctcctccctatcactcttggtcttgcacataatgattacc
ggagcatacgacgtgaatgcatcgcctaattcacgactgacaatattcgtcaagtcaagg
aaacatccgtactacctgaatggccacttgatctacgtactactctcccaagtcgtcgtc
gcgaccgcatgtctgctccgctgtgtcctactcgaccgcttcgccgtccgttgggcaaac
accttagtcccgcaaggagatgcgaaactgaagtcattcggcctcgcgcgcgtcgtaacc
gtcggccttaccgccctagtatacacgatacttgttaccgtcgcccagctctcggtcttc
gcgctcgcgcgatcggtcgtccttcccctgctgttccaggtcccggtcctcaatcgcttc
cttcgccctttcatggcgcacttccttcgaggcccctggactgtaaccctcctcactcgt
cattggtctctggtgtcccgcgcgttctaccttgcgctcactaccgtcgggatctgggaa
ttcgcggaaagtgccttcgatggtgtggttgcggagccgatcgctgtggcccctcaaacg
gctgaccagggcctgaccttgatctccggtatcacatctaccgacggatatctcaagcac
ttcgcgtacgcggaactgcgggagttctctgctgacgactcctccgccgccagcgcgcgc
cgtaccgcactcttcaccgaccagaaatacaacccgagcatgtggtcaacccttgccagg
gaagcactgctcgtgctcggccgtgattaccagctactcctgagcagaggaaaaccgcca
tcgcctgctgcagccgcacctgcacctgcgagcaaaccatctgtaccccttcccgcaccc
gcaacgccgctcatccgcacgaaggtctacaagcctcccaaaacctctcctcttcacgcg
gccttcgacaccttcgcgtcggacggtccgttggccgccgccgtatctgagaccgcagag
gctggcgcgtcgcacatcccggagctcttccggtcggtcatgccgaacaccccgcaggcc
acggccgaagcggccgtccagagcgtgaagaaggcagaggagaacgtcgccgccctcgtg
aacgagacgaagagcaagtggcgcgcgagcatcagcgcgtgcgtcccgggggtcgtgaag
cagtccgcgggccaggtgaagggctggtggacgcgcgagcgcgtgcaccgcgtcgcggaa
acgagccttccgaaccgccacatggacgccctcgctgcggaagcgctgtgccggctgacg
tgcgcgtcgctcacggaggacagctacggcatcgtgcagcgcgacatcccgaaaatcatc
gaggcgctgctctcgttcctcaccgcgctcgaggagtaccaggcggagctcaccgcggcg
cacacgcctgcgcccccgtcctcggagaaggcgtcgccgcgcgaggcggcggagcgggag
atgctcgcgatggaggcggcgcgggcgggcgaggtgctcggggtcgtcagcgacgccatc
agggacggtatcgtgcagattgtacgcacgttcggggacaagttgtcggcgttcaagttt
ccgccgcggattgcacgcaagctccaggggttcgtggattacaattaa
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