Trametes versicolor: TRAVEDRAFT_172822
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Entry
TRAVEDRAFT_172822 CDS
T04795
Name
(RefSeq) DEAD-domain-containing protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvs03009
]
TRAVEDRAFT_172822
Enzymes [BR:
tvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRAVEDRAFT_172822
Ribosome biogenesis [BR:
tvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRAVEDRAFT_172822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19411342
NCBI-ProteinID:
XP_008042372
JGI:
172822
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MDVQDTPGEPSGAPVEKLDVDMLPDPITFDSETLLPAWNTFQLHPQLARSLYARKFTEPT
PIQAQTLPLALKNRDVVGVAETGSGKTLAYGLPILHHLLTEAYSRPIPSSKTRRPVRALI
VTPTRELALQVSSHLNACLTHADVEVDDAGPAEGASDESSKDKSKPKAKGKGKAKAEVQG
DKPKSPPLVCVAAIVGGMSAQKQRRVLSRGVDVLVATPGRLWDIIQEDDELATQIENLRF
LVLDEADRMIESGHFAEMDNILRLTLRKQDDEIIEPENQEGEAEDSKEDVRAGELQTFVF
SATLSKDLQKNLKKRTHGRRRKNDKPASTLDDLLLRLDFRDPEPAVVDISPVGSVVATLT
ESKIECLVTDKDAYLYYFLLRYPGRTLVFLSAIDGIRRLLPLMDLLGVHAFPLHSQLEQR
QRLKNLDRFKSTPGAVLLATDIAARGLDVPAVDHVVHYQVPRTADAYVHRNGRTARAMRR
GFSLLMCVPDERKVVRALMHNLNRQEDEVPEMPVELHMLDKLKARIQLARSIDNAQHKIK
KENHERNWLKETAEAMELVLDSDLESDDGGAEAAPSKQKRKARAAKTAGLKAQLKEMLAQ
PLVARGVSTRYITSGVHSIADDLLAGEYHENMVGLKKVEAGTDLVPAKARKPKATPKVTA
RVSAKEEEEEWGGITGQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcaggacacacccggagaaccatctggggccccggtggagaagctagacgtt
gatatgcttccagatcccatcaccttcgactccgaaacgctccttccggcttggaataca
tttcagctccaccctcagctcgcgcgctctctgtatgccagaaagttcaccgagcctacg
ccgatccaggcacaaacgcttccacttgcgctgaagaacagggatgtcgtgggtgtggct
gagacgggttcgggaaaaacgctggcatatggactgccgatcctgcaccatctcctcact
gaggcctactcgcgtccgattcccagctcaaaaactcgccggccagttcgcgcactcatc
gtgacacctacgcgtgagcttgctctgcaggtctcttcacatctcaacgcttgcctcaca
catgcggatgttgaggtcgatgatgcggggcctgctgaaggtgcttcggacgagtcgtca
aaagacaagtccaagcccaaagctaagggtaagggcaaagccaaggcagaagtacagggc
gacaagcctaagagtccgcccttggtctgtgttgccgctatcgtggggggcatgtctgcg
cagaaacaacgacgcgttctctcccgcggcgtagacgtattggtcgcgacgccgggtcgg
ctctgggacatcatacaagaggacgacgagctggcgacgcaaatcgagaatctgcggttc
ctggtgcttgacgaagctgaccggatgatcgaatctggacatttcgcagagatggacaac
attttgcgcttgacgctgcgaaagcaagatgatgaaatcatcgagcctgagaaccaggag
ggcgaggcagaggacagcaaagaagacgttcgcgcaggcgagctgcaaacgttcgtgttc
tccgccacgctcagcaaggacctgcaaaagaacctcaaaaagcggacacacggaaggcgt
cgcaagaacgacaagcccgcctctacgctagacgatctcctgctacggttggacttccgc
gaccccgagccagccgtcgtcgacatcagccccgtcggcagcgttgttgcgacgctcacg
gagagcaagatcgagtgcctcgtcacggacaaggacgcatacctgtactacttcctcctg
cgctaccccggacgcacgcttgtcttcctgtccgcaatcgacggtatccggcggctgctc
cccctcatggacctgctcggcgtgcatgccttcccgctgcactcgcagctcgagcaacgc
caacgtcttaagaacttggaccggttcaagtctacccccggcgcggtgctgctcgcgacg
gacatcgccgcgcgtgggctcgacgttcccgcagtcgaccatgtcgtgcattaccaagtg
ccgcgcaccgcggacgcatacgtgcaccgaaacggtcggacggcccgcgcaatgcgccgc
gggttcagtctgttgatgtgtgtgccggacgagcgcaaggtcgttcgtgccctcatgcac
aatctcaacagacaggaagatgaggtcccggagatgccggtagaactacacatgttggac
aagctcaaggcacgcatccagcttgcacgctcgatagacaacgcacaacacaagatcaag
aaggagaaccacgagcgcaactggctcaaggagacggctgaggcgatggagctcgtgctc
gattcagatctcgagagcgacgacggtggggcggaggcagcaccgtcaaagcagaagcgc
aaggcgcgagcagcgaaaacggcggggttgaaggcgcagctaaaggagatgctcgcgcaa
ccgctcgtcgcgcggggcgtgtcgacgcggtatatcacctctggggtgcactcgatcgcg
gacgacctgcttgccggggaatatcacgagaacatggtcggcctcaaaaaggtggaggcg
ggcacggacctcgttcctgcaaaagctcggaagccgaaggcgacaccgaaagttactgcg
cgggtcagtgcgaaggaagaagaggaggagtggggaggaattactggccagtag
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integrated database retrieval system
