Trametes versicolor: TRAVEDRAFT_173537
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Entry
TRAVEDRAFT_173537 CDS
T04795
Name
(RefSeq) pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
tvs
Trametes versicolor
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tvs03016
]
TRAVEDRAFT_173537
Enzymes [BR:
tvs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
TRAVEDRAFT_173537
Transfer RNA biogenesis [BR:
tvs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TRAVEDRAFT_173537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
19411408
NCBI-ProteinID:
XP_008043158
JGI:
173537
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MEQVPVSPKLLQTPPPCDAAAKKANPGLKKIPPYWYPYTTMAKGRWLGREILEVVSTEFR
DRSMEFYRYALQSGVTTINGKIAKPDTIIRNGDRIENISHRHEPPVTSTPVRIVHHDRER
EFIVIDKPGSIPVHAAGRFFRNSLVEILKNDFGFEKTYTVNRLDRLTSGLMILPLNAKLA
NTVTQEFMNGQVRKEYVARCNGKFPEEEVICEEPLLTVDRQMGLNVVHPEGKHAKTIFKR
IRYDANTDTSVLHCRPMTGRSHQIRVHLQYLGHPIANDPIYSDPRIWGENLGKGGIDLTP
SEERSAPQAPGHFQFDAATNPESLHKGEAAAAASSSAAEPSGEAAVAGPKLLPRETGHDI
GMGSPVPLSAEVVGIITRLRNMKDEAEDWGRWRDVVFRAKGKLVPHGFDIPLPPQNQRKR
GGAAFAALSIASTPPPDAADAPTTGMDAAAAPTTDTDDEPPRTDQITLEDVAKFANSTPP
MSETPTPTPLADTPAASELTSSAAEQTPLSVFAASEPIVTETPIGDAEGMHYCPECFVPL
HPDPKPETLYIFLHALRYTTSLGCFETGMPEWAAEGWEWER
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtccccgtgtccccgaagctcttacagacgccgcctccctgcgatgcggcc
gcgaagaaagcgaacccaggcttgaagaaaatccccccatattggtatccgtacacaact
atggcgaagggccgctggttagggagggagatcctcgaggtggtttccaccgaattccgc
gatcggtcaatggagttctacagatatgcgctgcaatctggcgttacgacgatcaacggc
aaaattgcaaaacctgacacgatcatccgcaacggcgatcgcattgaaaacatctcacat
cgacatgaaccacctgttacatcgaccccggtccgcatcgtccaccacgacagggagaga
gaatttattgtgatagacaaaccaggatcgattcccgtgcacgcagccggccggttcttc
agaaatagcctagttgagatactcaagaatgactttggtttcgaaaagacctacacggta
aacaggctagataggctcacctccggcttgatgatcttgccgctaaacgcgaagctggcg
aatactgtgacgcaagagttcatgaacgggcaggtgagaaaggaatacgtcgcgcggtgc
aacggcaaattcccagaggaggaggtcatatgtgaagagccactcttgactgtcgacagg
cagatggggcttaacgttgtgcacccggaaggaaagcacgccaaaaccatattcaaaagg
atacgatacgacgcaaacacggacactagcgtcctccactgtcgtcccatgacaggcaga
tctcatcagattcgcgtccaccttcaatacctcggccacccaatcgcgaacgacccgata
tactctgaccctagaatttggggagagaacctagggaagggaggaattgacctcaccccg
agcgaggagcggtccgcgccacaggccccggggcatttccagttcgacgcggcgactaat
cctgagtccttacacaagggagaggccgccgccgccgcttcatcatctgccgccgaaccc
agcggagaggcggcggtggcgggcccgaaactactcccgcgcgagaccggccacgacatc
gggatgggctcacccgtcccgctctctgcggaggtggtgggcatcatcacgcggctgcgc
aacatgaaggatgaggctgaagactggggccgctggcgggacgtcgtgttccgcgcgaag
ggcaagctggtcccgcatgggttcgacatccccctcccgccgcagaaccaacgtaagcgc
ggtggcgccgcctttgccgcactctcgatcgcgtcgacgccccctcccgatgccgcagat
gccccgacaacagggatggatgcggccgctgctccaacgacagacactgacgacgaacct
cctcggacggaccagatcacgctcgaagacgtggcgaagttcgccaacagcacgcctccc
atgtccgagacgccgacgccgacgccgctcgctgacactcctgcggcgtcggagctgacc
tcttcagctgcagaacaaacgcctttgtcagtgttcgcagcgtccgagcccatcgtcaca
gagacgccgatcggggacgccgagggcatgcattactgccccgagtgcttcgtcccgctg
cacccggacccaaagccggaaacgctgtacatcttcctgcacgcgctgcggtatacgacg
agccttgggtgcttcgagaccgggatgccggagtgggcggcggaggggtgggagtgggag
cgctga
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