Trametes versicolor: TRAVEDRAFT_17573
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Entry
TRAVEDRAFT_17573 CDS
T04795
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tvs
Trametes versicolor
Pathway
tvs03020
RNA polymerase
tvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRAVEDRAFT_17573
09124 Replication and repair
03420 Nucleotide excision repair
TRAVEDRAFT_17573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvs03021
]
TRAVEDRAFT_17573
03400 DNA repair and recombination proteins [BR:
tvs03400
]
TRAVEDRAFT_17573
Transcription machinery [BR:
tvs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TRAVEDRAFT_17573
DNA repair and recombination proteins [BR:
tvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TRAVEDRAFT_17573
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
19411573
NCBI-ProteinID:
XP_008033472
JGI:
17573
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MQASLDAEPIVRIRDLKKNSVNFVLQNVDLAFVPALPSMSSPHLRLTVTAAQIRQLVQES
DDGGYTHCRDPRVLMQQWRVPAAIDMVEIETNTTVLPDEFIAHRLGMIPLVSTNCDEAMR
YTRDCTCEVRCQYCAIELMLNVSCHEGGHTMDITSDMLEVVPTSRPGFGGFDADSDGSEE
LAKRVESFGHPIGQGDPSTPPILICKIRKGQELRIRCIAKKGIAKEHSKWSPCAAVGFEY
DPHNKLRHTSYWFEYDARSEWPLSKNAKDEEPARDDLPFDYNAKPEKFYMDVETDGSLGA
QEVVMKGLAELQTKLANLVLGLKGDPPEADGFQNGAAALSGPANGAEPAAAAWGAPGGGG
GWSPARGGGGAGGGATSSWGAGAGGGSTSTWGTSPSRGAGGGATGAWGNSPAAAPGGWGV
PAGGSGGGTAGGWGSPAAGAGWGSPSQTQNGWNV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttctttggatgcagagcccatagtgcgcattcgcgacctcaagaaaaactcg
gtcaacttcgttctccagaatgtcgacctcgcgttcgtgcccgctctccccagcatgtcc
tcgccgcacctaaggcttacagtcacggctgcacagattcgccaactcgttcaggagagt
gatgatggcggatatacccactgtcgagacccgcgcgtgcttatgcagcaatggcgcgtc
cctgcagccattgacatggtcgaaatcgagaccaacacgaccgtcctccccgatgagttc
attgcgcatcgactcggaatgatacctctcgttagcacgaactgcgacgaggccatgcgg
tacactcgggactgcacatgcgaagtgcggtgtcagtattgcgcaatcgaactcatgctc
aacgtctcctgccacgaggggggccacacaatggacatcactagcgacatgctcgaggtc
gtgcctacttcgcggccaggctttggaggattcgacgcggactctgacggcagtgaggag
cttgctaagcgcgtagagtctttcgggcatccaattggccaaggcgatccctcaactccc
cctatcctcatttgcaagattcggaaagggcaggagctgcgaataaggtgtattgcaaag
aagggcatcgcaaaagagcactcaaaatggtctccgtgcgccgccgtcgggttcgagtac
gacccacacaacaagctgcgccacacatcgtactggttcgagtacgacgcgcgctcggag
tggccgctgagcaaaaacgcaaaggacgaggagcccgcacgggacgaccttccattcgac
tacaacgcgaaacccgagaaattctacatggacgtcgagacggacggctccctcggcgcg
caggaggtcgtcatgaagggcctcgcggaactccagacaaaactggccaacctagtcctg
ggcctcaagggcgaccccccagaggccgacggtttccagaacggcgccgcggcgctcagc
ggacccgccaacggtgcagagcccgctgcggccgcctggggcgcgcccggcggcggcggt
ggctggagccctgcacgcggaggaggtggcgcgggtgggggcgcgaccagctcatggggc
gcaggtgcaggcggaggctcgaccagcacctggggcaccagcccgtcgcgcggtgcgggc
gggggcgcgaccggggcatggggcaacagccctgctgctgcgccagggggctggggagtg
ccggctggaggcagcggaggtggtacggcaggcggatggggcagccctgccgctggcgct
ggctgggggagcccgtcgcagacgcaaaacgggtggaacgtctag
DBGET
integrated database retrieval system
