Trametes versicolor: TRAVEDRAFT_176082
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Entry
TRAVEDRAFT_176082 CDS
T04795
Name
(RefSeq) cohesin complex subunit psm1
KO
K06636
structural maintenance of chromosome 1
Organism
tvs
Trametes versicolor
Pathway
tvs04111
Cell cycle - yeast
tvs04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TRAVEDRAFT_176082
04113 Meiosis - yeast
TRAVEDRAFT_176082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvs03036
]
TRAVEDRAFT_176082
Chromosome and associated proteins [BR:
tvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
TRAVEDRAFT_176082
Meiosis-specific proteins
Cohesin complex and associated proteins
TRAVEDRAFT_176082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_15
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-GeneID:
19411601
NCBI-ProteinID:
XP_008045414
JGI:
176082
UniProt:
R7S892
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MPLIRIEVCDFKSYRGHQVIGPFRNFTSVIGPNGAGKSNLMDAISFVLGVKSAQLRSSQL
KDLVYRGRRLARNPDGEGAGPSQPQQDDEEEGEGEGEGTATKAWVLAVYEDADKKEWRFQ
RTISTTGASEYKLNNRVVTYSAYNAALIQHNILVKAKNFLVFQGDVEAVASQSPKELARL
IDQISGSLELAPDYEKAREALERATENATFNFTKRRGIAGEIKQYKEQKGEAERFEALCQ
ERDELVLRRILFKLYHIQHSLEEHARAIKEQNQTLAGLRAEQRKHEKALEDARAEQARAR
SNVMQKEKRIKKAEKALETKRPDLVRIEAQIKHAERKREKAQQELEKLQQTEAEQRRKLQ
ALQENLQTVQRAANAAQEVQRRAAQTNLSLSEESLEEYRRLKASASILAVDERQSLETLS
RDEKTAGRTLAQLKDKLEQLTQKRDKLSEEDRTQSQKKAELDEKVSELAAELKRVKQEHD
NQESERMRIEQLEKEINEKLVDIYEKLTQAGVDQQESQRETRLKETLANLQRIFPGVRGR
VVDLCKPTQRKYETAVAVVLGRNIDAIVVDEEKTAIDCIEYMRNQRAGQATFIPLDTIQV
KPVNDKFRAFAKGARLAVDVIHYDPAVERAMHHACGNALVCDSMEVARYVCYEKGQEVKA
VTLEGTIIHKSGLITGGKSSQQNGKKWEEKDVQGLQRVRDNLMAQLLELGKSKPRGKESE
VLIAEISRLESALHVARDDQKANKTRLSGIKDELKHVEREIRALQPDLRKAQAAYDSVKG
KIDALAAVINEAEDGVFEEFCEEIGVANIREYEERQLKVAQAESEARLQFDTQIARLTHA
IQFDEQQLRVTEERLKAYEDIIKSEGENLAKLEDEKTAAQEEIAEAEEAIQTLQDDLKAL
AEELEEKTKKVDEVKKTTNRAGKALDQALKEVAGHNDEIEKLGLERSAIYRKCRLDEIKL
PLLTGNLKNVPMEENLREEVAMDVDEDEEGTQQVKRVSDFGIEVDFDSLDEDEREDGSAE
TLKELDESISKVNAEIEHMAPNLKAMDRLDDVEAKLVETEKEAERARTDSKKAREQFNEI
KRKRCEMFNKAYNHISERIDQVYKDLTKGKMAPTGGVAYLTLEDSEEPYTAGIKYHAMPP
MKRFRDMEQLSGGEKTIAALALLFAIHSYQPSPFFVLDEVDAALDNTNVAKIASYIRSHA
SGTFQFVVISLKGSLYERSNSLVGIFRDQDVNSSRTLTLDLTQYDD
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcatccgcatcgaagtctgcgacttcaagtcttaccgcggccaccaggtcatc
ggccccttccgcaacttcacctccgtcattggcccaaatggcgcgggcaagtccaacctc
atggacgccatctctttcgttctcggagtcaagtctgcccagctccgctctagccagctc
aaggacctcgtctaccgtggccgtagactcgcccgaaacccagatggggagggcgctggt
ccttctcagcctcagcaggacgacgaagaggagggcgagggggaaggcgagggtacggca
accaaggcgtgggttctcgctgtctacgaggacgcggacaagaaggaatggcgtttccaa
cgaactatttccacgaccggagcgtccgaatacaaactgaacaaccgcgtcgtgacgtac
tccgcgtacaacgccgcactcatccagcacaacatcctcgtgaaggccaagaacttcctc
gtctttcaaggcgacgtcgaggccgtcgcgtcgcagtcgcccaaggagctcgcgcggctc
atcgaccaaatctccgggtcgctcgagctcgcgcccgactacgagaaggcacgcgaggcg
ctcgaacgtgcgactgagaacgcgacgttcaacttcacgaagcgccgcgggattgcgggc
gagatcaagcagtacaaggagcagaagggcgaagcggaacgcttcgaggcgctttgccag
gagcgggacgagctcgtgctccgccgcatcctgttcaagctctaccacatccagcactct
ctcgaggagcatgctcgggctatcaaggagcagaaccagacgctcgcaggtctacgtgcg
gagcagcgcaagcacgagaaggcgctcgaggacgcgcgcgctgagcaagccagggcgcgg
tcgaacgtcatgcagaaggagaagcgtatcaagaaggccgagaaggccttagagaccaag
cgcccagacttagtccgaatcgaggcgcagatcaagcacgccgagcggaagcgcgagaag
gcacagcaggagctagagaagctccagcagaccgaagctgagcagcggcggaagctgcag
gcgctacaagagaacctgcagacagtgcaaagagcggcaaacgcggcgcaagaggtgcag
cgtcgcgcggcgcaaactaacctatcgctgagtgaagagagtttggaggagtaccggaga
cttaaagcaagcgcgagtatccttgccgtcgacgagaggcagtcgctcgagacgctgtca
cgagacgagaagacggcgggccgtacacttgcccagctcaaggataagctcgagcagctg
acacagaagcgcgacaagttgtcggaagaggaccgcacacagagtcagaagaaggcagag
ctcgacgagaaggtgtcagagttggcggcagagcttaagcgcgtgaagcaagagcacgac
aaccaggagtctgagcgcatgcgtatcgaacagcttgagaaggagatcaacgagaaactc
gttgacatctacgagaagctgacgcaggcgggcgtcgaccagcaggagtcgcagcgcgag
acgcggctgaaggagacgctcgcgaacctgcagcggatcttccccggggtgcgcggacgc
gtggtggacctgtgtaagccgacgcagcgcaagtacgagacggcggtcgcggtcgtgctc
gggcggaacatcgacgcgatcgtggtcgacgaggagaagacggcgatcgactgcatcgag
tacatgcgcaaccagcgcgcggggcaggcgacgttcatcccgctcgacacgatccaggtc
aagcccgtgaacgacaagttccgcgcgttcgcgaagggcgcgcggttggcggtggatgtt
atacattatgaccccgcggtggagagggcgatgcatcatgcatgtgggaatgcgctggtg
tgcgactcgatggaggtcgcgcggtatgtgtgctatgagaaggggcaggaggtgaaagct
gttacgcttgaggggactatcatccacaagagtggtctcatcactggtggtaagagttcg
cagcagaacggcaagaagtgggaagagaaggatgtgcaaggcctccaacgcgtgcgcgac
aacttgatggcgcaactcctcgaacttggcaagtcgaagcctcggggcaaggagagcgag
gtcctcatcgcggagatcagccgcctagaatccgctctgcacgtcgcgcgcgacgaccaa
aaagcgaataagacgcggctgtcgggcatcaaagacgagctgaagcatgtcgagcgcgag
atccgcgcgctgcagccggacctgcgcaaggcgcaggcagcgtacgacagcgtgaagggc
aagatcgacgcgctcgcggcggtgatcaacgaggcggaggacggcgtgttcgaggagttc
tgcgaggagatcggggtcgcgaatattcgcgagtacgaggagcgccagctgaaggtggcg
caggcggagagcgaggcgcggctgcagttcgacacgcagatcgcgcgtcttacgcatgcc
atccagtttgacgagcagcagcttagggtgacggaggagcggctgaaggcttacgaggat
atcatcaagtctgagggcgagaacctggcgaagctggaggacgagaagaccgcagcgcag
gaggagatcgcagaggcggaggaggcgatccagacgctgcaagacgatctgaaggcgctc
gccgaggagctcgaggagaagacgaagaaggtggacgaggtcaagaagacgacgaatagg
gcgggcaaggcgcttgaccaggcattgaaggaggtcgccggccacaacgacgagattgag
aagcttgggttggagcgctctgcgatctaccggaagtgcaggctggatgagatcaagctg
ccgctgcttaccggtaacctcaagaacgtgcccatggaggagaacctccgcgaagaggtg
gcgatggacgtagacgaggacgaggaagggacccagcaggtcaagcgggtctcggacttt
ggcatcgaagtcgatttcgacagtctggacgaggacgagcgcgaggacggctcggccgag
acattgaaggaactcgacgagtccatctcgaaagtcaacgcggagatcgagcacatggcc
ccgaacctcaaggctatggacagactcgacgatgtcgaggcgaagctcgtagagactgag
aaggaagcggagagggcgcggactgactccaagaaggcgcgcgagcagttcaacgagatc
aagcgcaagcgttgcgagatgttcaacaaggcctacaatcacatctcggagcgcattgat
caggtgtacaaagacctcacgaagggcaagatggcgccgactggcggtgtcgcgtacctg
accctcgaagacagcgaggaaccatataccgccggcattaagtatcatgcgatgccgccc
atgaaacgtttccgtgacatggagcagctgtcaggaggggagaagacgatcgcggcgctt
gctctgctcttcgccatccacagctatcaaccatcgcccttcttcgtgctggacgaggtg
gatgccgcgctggacaacacgaacgtggcgaagatcgcgagctacatccggtcgcacgcg
tcggggacgttccagttcgtcgtcatcagtctcaagggctccctatacgagcggagcaac
tccttggttggtatcttccgagaccaggacgtgaacagttcgcggacgctgacactggat
ctcacgcaatacgacgactga
DBGET
integrated database retrieval system