Trametes versicolor: TRAVEDRAFT_18362
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Entry
TRAVEDRAFT_18362 CDS
T04795
Name
(RefSeq) Nop domain-containing protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tvs
Trametes versicolor
Pathway
tvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRAVEDRAFT_18362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvs03041
]
TRAVEDRAFT_18362
Spliceosome [BR:
tvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TRAVEDRAFT_18362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Flg_new_2
PaaA-like_N
Motif
Other DBs
NCBI-GeneID:
19411683
NCBI-ProteinID:
XP_008034736
JGI:
18362
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MSSLADELLADLEGLSEGEEEFEDNAEQKEPQPEASGSSAAAGVKRKASASDDEMSDVEG
EEGEGEDQEGAIGSLVLEGGIKPAEELDADEVQRMELGKVDDVRKVARLEGSKRMNDILK
EIEKYQANPSTTEQMSMPTHSNPEYNLIVQANNLSVDVDNEIMVVHKFIRDHYAPKFPEL
EQLVTDPPMYIRSVRALANSEDPTKVNLQGVLPPAIIMSVLVTATTTSGQQLPDSEWQAV
GRACDLADRLEEARKKIFMYVSSRMNILAPNLSAIVGTTTAAKLLGVAGGLSGLAKMPAC
NVHLLGAQKKIAAGFSSVTQRRHTGFVFQSEPVQQTPPEYRMKVQRTVGAKCALAARMDL
ERSRRDGAYGQQLREKIEKHIDRLAAPPPGKIVKALPIPNDGPKKRRGGKRARKAKEAYA
QTELRKLQNRMAFGEAEEEVGAFDQTKGLGMIGTGKVRAGVGEAKSRAKLSKANKLRVAA
LTKAAQSGTATSSGTATSLTVTPVQGFELTNRSAAAQRVKEANERWFSNGTFSFVGQKGT
STQK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcttgcggacgagttgctcgctgatctcgaaggtctctccgaaggcgaggaa
gaatttgaggacaatgccgagcaaaaggaaccacagcccgaggcgagcgggtcgtctgcg
gcagcaggcgtgaagcgcaaggcatctgcatcggacgacgagatgtccgacgtcgaaggc
gaggaaggcgagggcgaggaccaagagggtgcaattggaagtttagtcttggaaggaggc
atcaagcccgcagaagaattggacgcggatgaggtgcagcgcatggaactgggcaaggtg
gatgatgtccggaaagtggccaggttggaaggaagcaagcgtatgaacgacatcctcaag
gaaatagagaagtaccaggccaaccccagcaccacggagcagatgtctatgcccacacat
tccaaccccgagtacaacctcattgtgcaggccaacaacctgtcagtagatgtggacaac
gagatcatggtcgtgcacaagttcattcgcgaccactacgcaccaaagttccccgagttg
gaacaattggtgaccgaccctccaatgtacattcgctccgtccgagcactggccaactcc
gaggacccgacaaaagtcaacctacaaggcgtcctgccccctgctatcatcatgagtgtt
ctcgttaccgcgactacgacctcgggacagcaactccccgactcggagtggcaagctgtc
ggacgcgcgtgtgatctcgccgaccgcctggaggaggcgcggaagaagattttcatgtac
gtcagctcacgaatgaatattcttgcacccaacctatccgctatcgtcggtaccaccaca
gctgcgaaactgctcggtgttgctggcgggctgtcggggcttgccaagatgcctgcgtgt
aacgtccatctgcttggagcgcagaagaagatcgctgccggattctcctcagtaactcaa
cggcgacacacaggcttcgttttccaatccgagcctgtgcaacagacaccaccggaatat
cgcatgaaggtgcaacgtacggtcggagcaaaatgcgctttggctgcgcgaatggacctg
gagaggtcgcgtagagatggtgcctacggtcaacaactccgagaaaagattgagaagcac
atcgaccggctcgccgcaccacctccgggcaagattgtgaaggcgctgccgattcccaat
gacggcccgaagaagcgccgtggaggaaagcgcgcacgcaaagccaaggaggcatacgcc
caaactgaactgcggaagctccagaaccgtatggcgttcggagaggcggaagaggaagtc
ggcgcgttcgaccagaccaagggtctcggcatgattggcactggcaaggtccgggcaggc
gttggcgaggccaagagtcgtgcgaagttgtccaaggcgaacaagttgcgcgtcgccgcg
ctcacaaaggctgcgcagagcggcacggcgacgtcgtcaggaacggcgacatcattgacc
gttactcctgttcaaggattcgagttgacgaaccggtcagccgctgcgcaacgtgtgaag
gaagccaacgagcgctggttctcgaatggcacattctccttcgttggacagaagggcacc
agcacacagaagtag
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