Trametes versicolor: TRAVEDRAFT_23934
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Entry
TRAVEDRAFT_23934 CDS
T04795
Name
(RefSeq) NIC-domain-containing protein
KO
K14309
nuclear pore complex protein Nup93
Organism
tvs
Trametes versicolor
Pathway
tvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRAVEDRAFT_23934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvs03019
]
TRAVEDRAFT_23934
Messenger RNA biogenesis [BR:
tvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRAVEDRAFT_23934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
GlfT2_domain3
TPM_phosphatase
Motif
Other DBs
NCBI-GeneID:
19412308
NCBI-ProteinID:
XP_008043348
JGI:
23934
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MPRTLSSPERSEYPVGPLKEFIAPFPTTAIVFDVFRGRTFPMFLSRTVDPAPMVPIKLSE
EGLSGKNWVKLSKMGASCSTLQDTDLAGYLSHAHEQNLISTIEEGRRETQEEFYRVLEDR
GRRDWEARKKRVFEQLGARVGGENRAVADLKKSTHGKNLLSVSVGPAPTLQMQSKMMAYD
RVVADLNASRLRGTLYPIVHALVQASQFTNSDPRSQQTTQNFHVLAKITGEPASLPPLSH
TGAHILNAPLIERKYARAYLGDRESREAVELRRQIAKGARQALQEQYWDVIERTIQARAT
EARLGGDPSVANKIRAYILLRHYRNGEWEDRIELVASQPLCARLFYLIGTGHAQEALEEA
TRLQQAIEHRESSFLSHLRAWVESADRRLPKPHRDQLHTAYNAHMLHSATADQFKLALYK
LLGKIDPARRSVAQVTVTTEDWLWFQLSMVDEDEFGGLRGLAEVLLSYGERHMMACLARR
ASSVAFGQVSFSCAASSKELSRRCGTTTKPRWRPSILRLHSRITSGTIEQNALLLKLDDT
REYNKHILNCNVKSSEEADHIPEAIKLYNLAGDYTTVISVLAQALGNTLAQPSVDEKART
CTNRPVGRERDAVISMLRVRKAMDAKDAGHVESALELMESTDLIPMDCDVAKITKHAEEF
CELPDALQHNLQKFLALTMDIPAP
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggacgctgtcatcaccagagcggtcagagtacccggtagggcccttgaaggag
ttcatcgcgccatttccgaccaccgcgattgtcttcgacgtcttcagaggaaggacgttc
ccgatgtttttgagcaggactgtggaccctgcaccgatggtgcctatcaagctgagcgaa
gaaggcctcagcgggaagaactgggtaaaactatcaaaaatgggggcttcctgctcaacg
ctccaagacactgatctcgcgggctacctgagccatgcacacgaacagaacctgatatct
acaattgaagagggccgaagggagacgcaggaggagttctaccgcgtgctcgaagaccga
ggtcggagagactgggaggcgcgcaagaaacgcgtcttcgagcagctcggcgcgcgtgtg
ggcggggagaacagggcggtggcggatctcaagaagagcacgcatggcaagaacttgcta
tctgtgagtgtgggtccagcacctaccctgcaaatgcagagcaagatgatggcctatgat
cgtgtcgttgccgatctcaacgcctcgcgactgcgcgggacattgtaccccatcgtccac
gcactcgtccaggcgtcgcagttcaccaactctgacccgcggtcgcaacaaaccactcag
aactttcatgtcctggccaaaatcaccggggagcccgcgtcgctccccccattgtcacac
accggcgcgcacatcctcaacgcgccactcattgagcgcaagtatgctcgtgcatatttg
ggtgatcgtgaatcacgcgaggctgttgaactccgcaggcagattgccaagggcgcacgc
caagcgctgcaggagcaatattgggacgtcattgagcgtaccatccaagcgcgtgcaacg
gaggcgcgattgggcggtgacccgagcgtggccaacaagatcagggcgtacatacttttg
cgccactaccgcaatggcgagtgggaggacaggattgagctcgtggcgagccaacctctc
tgtgcaagactattctatttgattggcaccggacacgcgcaagaagcgctggaagaagca
acgcgcctccagcaagcgattgaacaccgcgaatctagcttcctcagccacctgagggca
tgggtcgagtctgcggacagacggctacccaaaccacatcgcgaccagttgcacacagcg
tacaacgcgcatatgctccactctgcgacggcagaccagttcaaactcgcactatacaag
cttctgggtaagatcgacccggcgcgcaggagcgtcgcgcaagtcacggtcaccacggag
gactggctttggttccagctgtcgatggttgacgaggacgagttcggtggcctgagagga
cttgcggaggtgctgctgagctacggcgagcggcatatgatggcatgcctggccagaagg
gcgtcaagcgtggcgtttgggcaggtgtctttctcatgtgcggccagttcgaaagagctg
tcgcggcgctgtgggaccaccacaaaaccgaggtggaggccgtccatcttgcgattgcac
tcgcgtatcacgagcggcacgatcgagcagaacgcactcctgctcaagctcgacgacacg
cgcgagtacaacaagcacatcctcaactgcaatgtgaagtcgtctgaggaggccgaccat
atcccggaagcgatcaagctgtacaacctcgcgggtgactacacaaccgtcatctccgta
cttgcgcaagcgctggggaacacgctcgcgcagcccagtgtcgacgagaaagcgcgcacg
tgcacgaaccgcccagtcggccgcgagcgcgacgcggtcatcagcatgcttcgtgtgcgc
aaggcgatggacgcgaaggacgcggggcacgtcgagagcgcgctcgagctcatggagtcg
acggacctcatcccgatggactgcgacgtcgcgaagatcacaaagcatgcagaggagttc
tgtgagcttccggacgcgctgcagcacaacctgcagaagttccttgcgctcacaatggac
atccctgcgccgtga
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