Trametes versicolor: TRAVEDRAFT_24492
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Entry
TRAVEDRAFT_24492 CDS
T04795
Name
(RefSeq) pectin lyase-like protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tvs
Trametes versicolor
Pathway
tvs00040
Pentose and glucuronate interconversions
tvs01100
Metabolic pathways
Module
tvs_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tvs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
TRAVEDRAFT_24492
Enzymes [BR:
tvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
TRAVEDRAFT_24492
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
19412375
NCBI-ProteinID:
XP_008044636
JGI:
24492
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MRASLSLLTIALGCWASCASAAAASKEKVCSLRPLGHGRDDTDQVEAAIAKCGHFGTTVF
APGQYNITRKMTWDLVSSRVDLHGSLNFKPDIAYWLDPANTYRVIFIQSQASWFVLTGRD
FTVDAHNAGGIAGNGQAWWSFFANRTRADGDGRPVALTLSNVTRGVVRDFRVEGQPFWCN
AVADSSEVVYDGMYCNATNADPVWAGQNIVPNTDGINTYRSDKISLLRFDITSGDDCLAI
KGNSTNIFAKDITCRGGNGIAIGSLGQYAGLPDIVDNLVMEDLKLIRLDPQVQPNMVSGV
YLKTWTGSVHGAPPTGGGGGGGFVSNVVAKGVSVDRVTVPIHLYQTNGGGSGDTPSSLQF
SNLTFSDWTGTSLRNTIVDVECSPAVPCPNIRFENVNIAPPNGTAASFKCINVASEFGLP
ACNATGAA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcatcactgagcttgttgacgatcgcgctggggtgttgggcgtcgtgcgccagc
gctgcggcggcctctaaggagaaggtctgctccttgcggccccttggccatgggagggac
gacactgatcaggttgaagccgccatcgcgaaatgcggacatttcggaacgaccgtgttc
gcaccggggcagtataacatcactaggaaaatgacctgggacctcgtctcgtcccgcgtc
gacctgcacggctccctaaacttcaaacccgacatcgcgtactggctcgacccggccaac
acctaccgcgtgatcttcatccagtcccaggcgtcctggttcgtgctcaccgggcgcgac
ttcaccgtcgacgcgcacaacgctgggggcatcgcgggcaacggccaggcgtggtggtcg
ttcttcgcgaaccgcacgcgcgcggacggtgacgggcgccccgtcgcgctcaccctgtcc
aacgtcaccaggggcgtggtgagggacttccgcgttgaggggcagccgttctggtgcaat
gcggtcgcggatagcagcgaggtggtgtatgatgggatgtactgcaatgcgacgaatgcg
gatccggtgtgggcggggcagaacatcgttcctaacacggatggtatcaacacataccgt
tccgacaagatttccctcctgcgcttcgatatcactagcggcgacgattgtttagccatc
aaagggaactcgacgaacatcttcgcgaaggacattacctgccgcggagggaacgggatc
gccatcggctcgctcggccagtacgccggcctccccgatatcgtcgacaatttggtgatg
gaagacctcaagttgatccgcctagacccacaagtacagccgaacatggtctcgggcgta
tacctcaaaacgtggacgggctccgtgcacggcgcgccgcccaccggaggcggaggtggc
ggcggattcgtgtcgaacgtggtcgcgaagggcgtgtcggtcgaccgcgtcacggtcccg
atccacctctatcagacgaacggcggcggctcgggcgacacgccgtcgagtctgcagttc
agcaacctgacgttcagcgactggacgggcacctctttgcgcaacaccatcgtggacgtg
gagtgcagcccggcggtgccgtgcccaaacatccgcttcgagaacgtgaacatcgccccg
ccgaacggcaccgcggcgagcttcaagtgcatcaatgttgcgagcgagttcgggctgcct
gcgtgcaatgccactggtgcggcctaa
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