KEGG   Trametes versicolor: TRAVEDRAFT_25956
Entry
TRAVEDRAFT_25956  CDS       T04795                                 
Name
(RefSeq) Sm-like ribonucleoprotein
  KO
K11097  small nuclear ribonucleoprotein E
Organism
tvs  Trametes versicolor
Pathway
tvs03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRAVEDRAFT_25956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvs03019]
    TRAVEDRAFT_25956
   03041 Spliceosome [BR:tvs03041]
    TRAVEDRAFT_25956
   03032 DNA replication proteins [BR:tvs03032]
    TRAVEDRAFT_25956
Messenger RNA biogenesis [BR:tvs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     TRAVEDRAFT_25956
Spliceosome [BR:tvs03041]
 Complex A
  U1 snRNP components
   Sm proteins
    TRAVEDRAFT_25956
  U2 snRNP components
    TRAVEDRAFT_25956
 Complex B
  U1 snRNP components
    TRAVEDRAFT_25956
  U4/U6.U5 tri-snRNP components
    TRAVEDRAFT_25956
 Complex C
  U2 snRNP components
    TRAVEDRAFT_25956
DNA replication proteins [BR:tvs03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     TRAVEDRAFT_25956
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 19412593
NCBI-ProteinID: XP_008031889
JGI: 25956
LinkDB
Position
Unknown
AA seq 87 aa
MSGRQQRVMVQPINVIFKNLQQRTKVVIWLYDNIDMRIEGTIIGFDEFMNIVIEDAAEVY
VKDAKPRRELGRILLKGDNITLIQQVV
NT seq 264 nt   +upstreamnt  +downstreamnt
atgtctggacgtcagcagagggtgatggttcagcccatcaatgtcatcttcaagaacttg
caacagaggacaaaagtcgtgatctggttgtacgacaacattgatatgcgcattgaaggg
actatcattggtttcgacgaattcatgaacatcgtgatcgaagacgcggcagaggtctac
gtgaaggacgcaaagcctaggcgagagcttggtcgcatactgctaaaaggcgacaacatc
acgctcatccaacaagttgtttga

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